[CP2K-user] [CP2K:14990] Re: CPASSERT failed

钟璨宇 cqs... at gmail.com
Wed Mar 24 02:37:27 UTC 2021


The same bug happend on my machine. 
I tried several OS like fedora 33, redhat 7.9 & 8.3 and centos 7.9 & 8.3 . 
Maybe serval months later, it will be get rid of this bug



Program received signal SIGABRT: Process abort signal.

Backtrace for this error:

Program received signal SIGABRT: Process abort signal.

Backtrace for this error:

Program received signal SIGABRT: Process abort signal.

Backtrace for this error:

Program received signal SIGABRT: Process abort signal.

Backtrace for this error:

Program received signal SIGABRT: Process abort signal.

Backtrace for this error:

Program received signal SIGABRT: Process abort signal.

Backtrace for this error:

Program received signal SIGABRT: Process abort signal.

Backtrace for this error:

Program received signal SIGABRT: Process abort signal.

Backtrace for this error:

Program received signal SIGABRT: Process abort signal.

Backtrace for this error:

Program received signal SIGABRT: Process abort signal.

Backtrace for this error:

Program received signal SIGABRT: Process abort signal.

Backtrace for this error:

Program received signal SIGABRT: Process abort signal.

Backtrace for this error:

Program received signal SIGABRT: Process abort signal.

Backtrace for this error:

Program received signal SIGABRT: Process abort signal.

Backtrace for this error:
#0  0x7f53a00f3171 in ???
#1  0x7f53a00f2313 in ???
#2  0x7f539ec8687f in ???
#3  0x7f539ec867ff in ???
#4  0x7f539ec70c34 in ???
#5  0x27c36cf in __base_hooks_MOD_cp_abort
at /home/az/software/cp2km20210321/src/base/base_hooks.F:80
#6  0x27c3756 in __base_hooks_MOD_cp__a
at /home/az/software/cp2km20210321/src/base/base_hooks.F:163
#7  0x4fc1ab in cp2k
at /home/az/software/cp2km20210321/src/start/cp2k.F:201
#8  0x43b83c in main
at /home/az/software/cp2km20210321/src/start/cp2k.F:44
#0  0x7f3c41ce9171 in ???
#1  0x7f3c41ce8313 in ???
#2  0x7f3c4087c87f in ???
#3  0x7f3c4087c7ff in ???
#4  0x7f3c40866c34 in ???
#5  0x27c36cf in __base_hooks_MOD_cp_abort
at /home/az/software/cp2km20210321/src/base/base_hooks.F:80
#6  0x27c3756 in __base_hooks_MOD_cp__a
at /home/az/software/cp2km20210321/src/base/base_hooks.F:163
#7  0x4fc1ab in cp2k
at /home/az/software/cp2km20210321/src/start/cp2k.F:201
#8  0x43b83c in main
at /home/az/software/cp2km20210321/src/start/cp2k.F:44
#0  0x7f76a5509171 in ???
#1  0x7f76a5508313 in ???
#2  0x7f76a409c87f in ???
#3  0x7f76a409c7ff in ???
#4  0x7f76a4086c34 in ???
#0  0x7f12b8e35171 in ???
#1  0x7f12b8e34313 in ???
#2  0x7f12b79c887f in ???
#3  0x7f12b79c87ff in ???
#4  0x7f12b79b2c34 in ???
#5  0x27c36cf in __base_hooks_MOD_cp_abort
at /home/az/software/cp2km20210321/src/base/base_hooks.F:80
#6  0x27c3756 in __base_hooks_MOD_cp__a
at /home/az/software/cp2km20210321/src/base/base_hooks.F:163
#5  0x27c36cf in __base_hooks_MOD_cp_abort
at /home/az/software/cp2km20210321/src/base/base_hooks.F:80
#6  0x27c3756 in __base_hooks_MOD_cp__a
at /home/az/software/cp2km20210321/src/base/base_hooks.F:163
#7  0x4fc1ab in cp2k
at /home/az/software/cp2km20210321/src/start/cp2k.F:201
#8  0x43b83c in main
at /home/az/software/cp2km20210321/src/start/cp2k.F:44
#7  0x4fc1ab in cp2k
at /home/az/software/cp2km20210321/src/start/cp2k.F:201
#8  0x43b83c in main
at /home/az/software/cp2km20210321/src/start/cp2k.F:44
#0  0x7f0dba736171 in ???
#1  0x7f0dba735313 in ???
#2  0x7f0db92c987f in ???
#3  0x7f0db92c97ff in ???
#4  0x7f0db92b3c34 in ???
#5  0x27c36cf in __base_hooks_MOD_cp_abort
at /home/az/software/cp2km20210321/src/base/base_hooks.F:80
#6  0x27c3756 in __base_hooks_MOD_cp__a
at /home/az/software/cp2km20210321/src/base/base_hooks.F:163
#7  0x4fc1ab in cp2k
at /home/az/software/cp2km20210321/src/start/cp2k.F:201
#8  0x43b83c in main
at /home/az/software/cp2km20210321/src/start/cp2k.F:44
#0  0x7f591b919171 in ???
#1  0x7f591b918313 in ???
#2  0x7f591a4ac87f in ???
#3  0x7f591a4ac7ff in ???
#4  0x7f591a496c34 in ???
#5  0x27c36cf in __base_hooks_MOD_cp_abort
at /home/az/software/cp2km20210321/src/base/base_hooks.F:80
#6  0x27c3756 in __base_hooks_MOD_cp__a
at /home/az/software/cp2km20210321/src/base/base_hooks.F:163
#7  0x4fc1ab in cp2k
at /home/az/software/cp2km20210321/src/start/cp2k.F:201
#8  0x43b83c in main
at /home/az/software/cp2km20210321/src/start/cp2k.F:44
#0  0x7f43a207c171 in ???
#1  0x7f43a207b313 in ???
#2  0x7f43a0c0f87f in ???
#3  0x7f43a0c0f7ff in ???
#4  0x7f43a0bf9c34 in ???
#5  0x27c36cf in __base_hooks_MOD_cp_abort
at /home/az/software/cp2km20210321/src/base/base_hooks.F:80
#6  0x27c3756 in __base_hooks_MOD_cp__a
at /home/az/software/cp2km20210321/src/base/base_hooks.F:163
#7  0x4fc1ab in cp2k
at /home/az/software/cp2km20210321/src/start/cp2k.F:201
#8  0x43b83c in main
at /home/az/software/cp2km20210321/src/start/cp2k.F:44
#0  0x7f5f4d7dc171 in ???
#1  0x7f5f4d7db313 in ???
#2  0x7f5f4c36f87f in ???
#3  0x7f5f4c36f7ff in ???
#4  0x7f5f4c359c34 in ???
#5  0x27c36cf in __base_hooks_MOD_cp_abort
at /home/az/software/cp2km20210321/src/base/base_hooks.F:80
#6  0x27c3756 in __base_hooks_MOD_cp__a
at /home/az/software/cp2km20210321/src/base/base_hooks.F:163
#0  0x7fb74537f171 in ???
#1  0x7fb74537e313 in ???
#2  0x7fb743f1287f in ???
#3  0x7fb743f127ff in ???
#4  0x7fb743efcc34 in ???
#7  0x4fc1ab in cp2k
at /home/az/software/cp2km20210321/src/start/cp2k.F:201
#8  0x43b83c in main
at /home/az/software/cp2km20210321/src/start/cp2k.F:44
#5  0x27c36cf in __base_hooks_MOD_cp_abort
at /home/az/software/cp2km20210321/src/base/base_hooks.F:80
#6  0x27c3756 in __base_hooks_MOD_cp__a
at /home/az/software/cp2km20210321/src/base/base_hooks.F:163
#7  0x4fc1ab in cp2k
at /home/az/software/cp2km20210321/src/start/cp2k.F:201
#8  0x43b83c in main
at /home/az/software/cp2km20210321/src/start/cp2k.F:44
#0  0x7fc6d8a60171 in ???
#1  0x7fc6d8a5f313 in ???
#2  0x7fc6d75f387f in ???
#3  0x7fc6d75f37ff in ???
#4  0x7fc6d75ddc34 in ???
#5  0x27c36cf in __base_hooks_MOD_cp_abort
at /home/az/software/cp2km20210321/src/base/base_hooks.F:80
#6  0x27c3756 in __base_hooks_MOD_cp__a
at /home/az/software/cp2km20210321/src/base/base_hooks.F:163
#7  0x4fc1ab in cp2k
at /home/az/software/cp2km20210321/src/start/cp2k.F:201
#8  0x43b83c in main
at /home/az/software/cp2km20210321/src/start/cp2k.F:44
#0  0x7fbb990fb171 in ???
#1  0x7fbb990fa313 in ???
#2  0x7fbb97c8e87f in ???
#3  0x7fbb97c8e7ff in ???
#4  0x7fbb97c78c34 in ???
#5  0x27c36cf in __base_hooks_MOD_cp_abort
at /home/az/software/cp2km20210321/src/base/base_hooks.F:80
#6  0x27c3756 in __base_hooks_MOD_cp__a
at /home/az/software/cp2km20210321/src/base/base_hooks.F:163
#7  0x4fc1ab in cp2k
at /home/az/software/cp2km20210321/src/start/cp2k.F:201
#8  0x43b83c in main
at /home/az/software/cp2km20210321/src/start/cp2k.F:44
#0  0x7ff3a2601171 in ???
#1  0x7ff3a2600313 in ???
#2  0x7ff3a119487f in ???
#3  0x7ff3a11947ff in ???
#4  0x7ff3a117ec34 in ???
#5  0x27c36cf in __base_hooks_MOD_cp_abort
at /home/az/software/cp2km20210321/src/base/base_hooks.F:80
#6  0x27c3756 in __base_hooks_MOD_cp__a
at /home/az/software/cp2km20210321/src/base/base_hooks.F:163
#0  0x7f82ea645171 in ???
#1  0x7f82ea644313 in ???
#2  0x7f82e91d887f in ???
#3  0x7f82e91d87ff in ???
#4  0x7f82e91c2c34 in ???
#7  0x4fc1ab in cp2k
at /home/az/software/cp2km20210321/src/start/cp2k.F:201
#8  0x43b83c in main
at /home/az/software/cp2km20210321/src/start/cp2k.F:44
#5  0x27c36cf in __base_hooks_MOD_cp_abort
at /home/az/software/cp2km20210321/src/base/base_hooks.F:80
#6  0x27c3756 in __base_hooks_MOD_cp__a
at /home/az/software/cp2km20210321/src/base/base_hooks.F:163
#7  0x4fc1ab in cp2k
at /home/az/software/cp2km20210321/src/start/cp2k.F:201
#8  0x43b83c in main
at /home/az/software/cp2km20210321/src/start/cp2k.F:44
#0  0x7f5651c56171 in ???
#1  0x7f5651c55313 in ???
#2  0x7f56507e987f in ???
#3  0x7f56507e97ff in ???
#4  0x7f56507d3c34 in ???
#5  0x27c36cf in __base_hooks_MOD_cp_abort
at /home/az/software/cp2km20210321/src/base/base_hooks.F:80
#6  0x27c3756 in __base_hooks_MOD_cp__a
at /home/az/software/cp2km20210321/src/base/base_hooks.F:163
#7  0x4fc1ab in cp2k
at /home/az/software/cp2km20210321/src/start/cp2k.F:201
#8  0x43b83c in main
at /home/az/software/cp2km20210321/src/start/cp2k.F:44
--------------------------------------------------------------------------
Primary job  terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun noticed that process rank 5 with PID 0 on node r1 exited on signal 6 
(Aborted).
--------------------------------------------------------------------------

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