[CP2K-user] Steered Molecular Dynamics
Marcella Iannuzzi
marci... at gmail.com
Mon Nov 2 08:23:24 UTC 2020
Dear Devyesh Rana
You can run a series of MD with restraints, i.e., following an Umbrella
Sampling procedure.
You can run a series of MD with constraints, sampling the corresponding
Lagrangian multiplier, i.e., following a Thermodynamic Integration
procedure.
You can run MD with constraints, specifying a target, a target_growth, and
a target_limit to steer the change along the MD.
Kind regards
Marcella
On Friday, October 30, 2020 at 9:06:04 PM UTC+1 Dev Rana wrote:
> Is there an easy way of preconfiguring a system for steered molecular
> dynamics?
>
> Specifically, I'd like to understand a reaction in a solvent via AIMD.
> However, instead of waiting for spontaneous reactions to occur, I'd like to
> forcibly make particles interact. Using the potential of mean force to
> obtain transition states etc. Is there an easy way to constrain atoms and
> automatically have them incrementally move towards each other?
>
> I think the nudged elastic band method might help, but this may not be the
> best avenue.
>
> Any suggestions?
>
> Best Regards,
> Devyesh Rana
>
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