[CP2K-user] test of a new collective variable coded into CP2K
Wei Zhang
zwei88... at gmail.com
Sat Dec 22 12:29:44 UTC 2018
Dear Tao,
I'm a new cp2k user that wants to use umbrella sampling to calculate PMF,
with the following code something will be print in the **.metadynLog.
However, I am not sure what is the meaning and unit of the data, and how
could it be used to calculate the energy?
Many thanks for your help.
Wei
&FREE_ENERGY
&METADYN
DO_HILLS .FALSE.
&METAVAR
COLVAR 1
SCALE 1.
&END
&PRINT
&COLVAR
COMMON_ITERATION_LEVELS 3
&EACH
MD 1
&END
&END
&END
&END METADYN
&END FREE_ENERGY
在 2017年4月20日星期四 UTC+8下午10:56:03,Sun Tao写道:
>
> Dear CP2K users/developers:
>
> I have coded a new collective variable into CP2K, in order to do some
> umbrella sampling. I have implemented the calculation of the CV's value and
> its derivative. The value is already tested and gives correct results.
> However, I am wondering how to test the correctness of the derivative,
> since this is essential if I want to do umbrella sampling simulations.
>
> If you have some experience in implementing CV's in CP2K, I would like to
> know how you tested the correctness of your implementation. I would
> appreciate if you could help me.
>
> Thanks ~
>
> Tao
>
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