Bug? The conserved quantity is NOT conserved after flexible cell MD is restarted
Rustam
rusta... at gmail.com
Sat Aug 13 05:56:39 UTC 2016
Hi guys,
As Amandine Chouanard mentioned in a recent post
<https://groups.google.com/forum/#!topic/cp2k/mwieBkpEjns>the conserved
quantity shows discontinuities when a flexible cell MD simulation is
restarted. I used her input file and found that restart works fine with NVT
and NPT_I simulations, but NOT with NPT_F (see attached figure). The
discontinuities in NVT_F the conserved quantity are larger if restarts are
less frequent (i.e. trajectory pieces are longer).
It seems that the conserved quantities in NPT_I and NPT_F simulations are
computed by the same subroutine in motion/md_conserved_quantities.F:390. So
it seems that the restart file contains ALL data on the current state of
the barostat and thermostat to ensure a smooth restart.
Is it possible that this has something to do with the CELL_REF setting?
Something along the lines that the grids before and after the restart are
different? I tried printing the GRID info but it seems to keep the number
of points constant...
I will appreciate any suggestions/comments,
Rustam
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