[CP2K:6600] Errors in regtests, CP2K 2.6
bbry... at gmail.com
bbry... at gmail.com
Tue Jun 9 13:06:54 UTC 2015
I didn't build libint (this is not my personal computer, but a cluster).
However, I checked in the config file for libint here, and it looks as if
it is configured with libint_max_am=4 and libderiv_max_am1=3
So I think you are right and that may very well be the reason for the
errors! I will try to build a new version of CP2K with those values.
The stack size limit is set to unlimited, so that should not be the
problem.
Thanks! I will tell you how it goes when I have tried with the new values
for libint_max_am and libderiv_max_am1
-Birgitte
On Tuesday, June 9, 2015 at 2:42:48 PM UTC+2, IBethune wrote:
>
> Hi Birgitte,
>
> Looking at all those test failures, they are all failing in or around the
> start of the HFX calculation. One thing that could cause such a failure is
> if that you have defined:
>
> > -D__LIBINT_MAX_AM=7 -D__LIBDERIV_MAX_AM1=6
>
> Do these correspond to the values you used when configuring libint?
>
> --with-libint-max-am=7 --with-libderiv-max-am1=6 ??
>
> Another possibility is that your system has a very small stack size limit.
> Run ‘ulimit -s’ to see what it is, and try running again after setting
> 'ulimit -s unlimited'
>
> Apart from that, I would suggest running one of the tests with 'ulimit -c
> unlimited’ to get a core file, then open it with a debugger (e.g. ‘gdb
> /path/to/my/cp2k.sopt /path/to/my/core.file' and run ‘bt’ to identify the
> location of the crash. If you post here we may be able to suggest a fix.
>
> - Iain
>
> --
>
> Iain Bethune
> Project Manager, EPCC
>
> Email: ibe... at epcc.ed.ac.uk <javascript:>
> Twitter: @IainBethune
> Web: http://www2.epcc.ed.ac.uk/~ibethune
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>
> > On 9 Jun 2015, at 12:44, bbr... at gmail.com <javascript:> wrote:
> >
> > I am trying to compile CP2K 2.6 (sopt, ssmp, popt, psmp) on a Linux
> Ubuntu 12.04 system.
> >
> > I tried compiling with Intel/MKL, but get runtime fail for all regtests.
> I then tried GCC/MKL, and most tests again failed.
> >
> > I am currently compiling with:
> >
> > GCC 4.9.1
> > FFTW 3.3.4
> > Libint 1.1.4
> > Libxc 2.2.2
> > ACML 5.3.1
> >
> > This works best of the combinations I have tried until now, but I still
> get about 5% runtime failure on the regtests for serial CP2K. The OpenMP
> version hangs on Ar-ref-3.inp and never goes further.
> >
> > Linux-x86-64-gfortran.sopt:
> >
> > CC = gcc
> > CPP =
> > FC = gfortran
> > LD = gfortran
> > AR = ar -r
> > DFLAGS = -D__ACML -D__FFTW3 -D__LIBINT -D__LIBXC2\
> > -D__LIBINT_MAX_AM=7 -D__LIBDERIV_MAX_AM1=6 -D__MAX_CONTR=4
> > CPPFLAGS = $$FFTW_INCLUDE $$ACML_INCLUDE $$LIBXC_INCLUDE
> $$LIBINT_INCLUDE
> > FCFLAGS = $(DFLAGS) -O2 --fast-math -ffree-form
> -ffree-line-length-none \
> > -ftree-vectorize -funroll-loops -mtune=native\
> > $$FFTW_INCLUDE $$ACML_INCLUDE $$LIBXC_INCLUDE $$LIBINT_INCLUDE
> > LDFLAGS = $(FCFLAGS) $$FFTW_LDFLAGS $$ACML_LDFLAGS $$LIBINT_LDFLAGS
> $$LIBXC_LDFLAGS
> > LIBS = -lacml -lfftw3 -lxcf90 -lxc -lderiv -lint -lm -ldl
> >
> >
> >
> > -------------------------------------------------------------------
> > Linux-x86-64-gfortran.ssmp:
> >
> > CC = gcc
> > CPP =
> > FC = gfortran
> > LD = gfortran
> > AR = ar -r
> > DFLAGS = -D__ACML -D__FFTW3 -D__LIBINT -D__LIBXC2\
> > -D__LIBINT_MAX_AM=7 -D__LIBDERIV_MAX_AM1=6 -D__MAX_CONTR=4
> > CPPFLAGS = $$FFTW_INCLUDE $$ACML_INCLUDE $$LIBXC_INCLUDE
> $$LIBINT_INCLUDE
> > FCFLAGS = $(DFLAGS) -O0 -g -ffree-form -ffree-line-length-none\
> > -fopenmp -ftree-vectorize -funroll-loops\
> > -mtune=native\
> > $$FFTW_INCLUDE $$ACML_INCLUDE $$LIBXC_INCLUDE
> $$LIBINT_INCLUDE
> > LDFLAGS = $(FCFLAGS) $$FFTW_LDFLAGS $$ACML_LDFLAGS $$LIBINT_LDFLAGS
> $$LIBXC_LDFLAGS -static-libgfortran
> > LIBS = -lacml -lfftw3 -lfftw3_threads -lxcf90 -lxc -lderiv -lint
> -lm -ldl
> >
> >
> > I have attached the error messages and the list of status of regtest for
> sopt.
> >
> > Any suggestions to what the problem might be?
> >
> > Thank you!
> >
> > -Birgitte Brydsö
> >
> >
> >
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> > <output_regtest_acml_gfortran491.txt><error_summary.txt>
>
>
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