[CP2K:6600] Errors in regtests, CP2K 2.6
Iain Bethune
ibet... at epcc.ed.ac.uk
Tue Jun 9 12:42:18 UTC 2015
Hi Birgitte,
Looking at all those test failures, they are all failing in or around the start of the HFX calculation. One thing that could cause such a failure is if that you have defined:
> -D__LIBINT_MAX_AM=7 -D__LIBDERIV_MAX_AM1=6
Do these correspond to the values you used when configuring libint?
--with-libint-max-am=7 --with-libderiv-max-am1=6 ??
Another possibility is that your system has a very small stack size limit. Run ‘ulimit -s’ to see what it is, and try running again after setting 'ulimit -s unlimited'
Apart from that, I would suggest running one of the tests with 'ulimit -c unlimited’ to get a core file, then open it with a debugger (e.g. ‘gdb /path/to/my/cp2k.sopt /path/to/my/core.file' and run ‘bt’ to identify the location of the crash. If you post here we may be able to suggest a fix.
- Iain
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Iain Bethune
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> On 9 Jun 2015, at 12:44, bbry... at gmail.com wrote:
>
> I am trying to compile CP2K 2.6 (sopt, ssmp, popt, psmp) on a Linux Ubuntu 12.04 system.
>
> I tried compiling with Intel/MKL, but get runtime fail for all regtests. I then tried GCC/MKL, and most tests again failed.
>
> I am currently compiling with:
>
> GCC 4.9.1
> FFTW 3.3.4
> Libint 1.1.4
> Libxc 2.2.2
> ACML 5.3.1
>
> This works best of the combinations I have tried until now, but I still get about 5% runtime failure on the regtests for serial CP2K. The OpenMP version hangs on Ar-ref-3.inp and never goes further.
>
> Linux-x86-64-gfortran.sopt:
>
> CC = gcc
> CPP =
> FC = gfortran
> LD = gfortran
> AR = ar -r
> DFLAGS = -D__ACML -D__FFTW3 -D__LIBINT -D__LIBXC2\
> -D__LIBINT_MAX_AM=7 -D__LIBDERIV_MAX_AM1=6 -D__MAX_CONTR=4
> CPPFLAGS = $$FFTW_INCLUDE $$ACML_INCLUDE $$LIBXC_INCLUDE $$LIBINT_INCLUDE
> FCFLAGS = $(DFLAGS) -O2 --fast-math -ffree-form -ffree-line-length-none \
> -ftree-vectorize -funroll-loops -mtune=native\
> $$FFTW_INCLUDE $$ACML_INCLUDE $$LIBXC_INCLUDE $$LIBINT_INCLUDE
> LDFLAGS = $(FCFLAGS) $$FFTW_LDFLAGS $$ACML_LDFLAGS $$LIBINT_LDFLAGS $$LIBXC_LDFLAGS
> LIBS = -lacml -lfftw3 -lxcf90 -lxc -lderiv -lint -lm -ldl
>
>
>
> -------------------------------------------------------------------
> Linux-x86-64-gfortran.ssmp:
>
> CC = gcc
> CPP =
> FC = gfortran
> LD = gfortran
> AR = ar -r
> DFLAGS = -D__ACML -D__FFTW3 -D__LIBINT -D__LIBXC2\
> -D__LIBINT_MAX_AM=7 -D__LIBDERIV_MAX_AM1=6 -D__MAX_CONTR=4
> CPPFLAGS = $$FFTW_INCLUDE $$ACML_INCLUDE $$LIBXC_INCLUDE $$LIBINT_INCLUDE
> FCFLAGS = $(DFLAGS) -O0 -g -ffree-form -ffree-line-length-none\
> -fopenmp -ftree-vectorize -funroll-loops\
> -mtune=native\
> $$FFTW_INCLUDE $$ACML_INCLUDE $$LIBXC_INCLUDE $$LIBINT_INCLUDE
> LDFLAGS = $(FCFLAGS) $$FFTW_LDFLAGS $$ACML_LDFLAGS $$LIBINT_LDFLAGS $$LIBXC_LDFLAGS -static-libgfortran
> LIBS = -lacml -lfftw3 -lfftw3_threads -lxcf90 -lxc -lderiv -lint -lm -ldl
>
>
> I have attached the error messages and the list of status of regtest for sopt.
>
> Any suggestions to what the problem might be?
>
> Thank you!
>
> -Birgitte Brydsö
>
>
>
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> <output_regtest_acml_gfortran491.txt><error_summary.txt>
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