[CP2K-user] [CP2K:22304] Troubleshooting: changing periodicity and index to radix array not found
Michela Cavalieri
bnzmichela at gmail.com
Tue Jul 7 13:49:27 UTC 2026
Hello everyone!
I have tried to troubleshoot this on my own for the past two weeks with no
success. Could I get some advice? Here is my process:
1. I prepared a 256 Ga atom slab with XYZ periodicity.
The stress tensor and pressure fluctuations matched my calculated
fluctuation values. I got good convergence for temperature.
1. I creating a bulk structure of my desired final dimensions. Vacuum
padding was 1/2 of the interatomic distance of Ga-Ga bond (ca 1.35 A).
GEO_OPT.
2. NVT MD
3. NPT MD
4. Added vacuum layer in the z-direction to form a surface.
5. NPT MD. (last restart, stress trajectory and output:
*Ga1_NPT_vac_15-1.restart* *Ga1_NPT_vac_15-1.stress* *18202783.out*)
2. I prepared an explicit solvent structure using Maestro Schrodinger
and added it on top. (*Ga_solvent.xyz*). Total 1690 atoms.
I have been trying since to run GEO_OPT with XY periodicity to no avail (*geoopt
(2).in*). All of my attempts result in the Index to Radix Array Not
Found error.
See *18821106.out* for example.
So far, I have tried to:
- Reduce CUTOFF and REL_CUTOFF from 600, 60 to 400, 40.
- Rounding off my unit cell dimensions.
- Changed FFT library.
- Added vacuum in Z.
- Switched POISSON_SOLVER from WAVELET to MT.
And I am still getting the same error. I have hit a wall with my
understanding of the software and I am hoping someone will help me
understand what is going on. Is my only option to do XYZ periodicity?
Thank you very much,
Michela Cavalieri
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