[CP2K-user] [CP2K:20330] Dipole Calculation Randomly Freezing
Sam Varner
varner.s9 at gmail.com
Fri Jun 14 22:23:51 UTC 2024
Hello,
I am trying to loop over frames using reftraj and calculate the molecular
dipole moments. I believe my input script is correct since the calculation
works for some amount of time before eventually freezing.
Upon freezing, there are no errors, and the program does not terminate, I
just notice the dipole files no longer output and the cp2k.out file stops
updating. The calculation appears to freeze right before outputting the
fermi energy and the LOCALIZATION.
I have tried using the ASE cp2k calculator as well as the direct cp2k.psmp,
and both encountered the same issue.
Here is my abridged cp2k input script:
&GLOBAL
EXTENDED_FFT_LENGTHS T
PROJECT cp2k
RUN_TYPE MD
&END GLOBAL
&MOTION
&MD
ENSEMBLE REFTRAJ
STEPS 1000
&REFTRAJ
TRAJ_FILE_NAME input.xyz
EVAL_ENERGY_FORCES T
&END REFTRAJ
&END MD
&END MOTION
&FORCE_EVAL
METHOD Quickstep
&DFT
BASIS_SET_FILE_NAME BASIS_FILE
POTENTIAL_FILE_NAME POTENTIAL_FILE
&LOCALIZE
&PRINT
&MOLECULAR_DIPOLES
PERIODIC T
REF COM
FILENAME ./dipoles/dipole
&EACH
QS_SCF 1
&END EACH
&END MOLECULAR_DIPOLES
&END PRINT
&END LOCALIZE
&QS
METHOD GPW
EXTRAPOLATION PS
EXTRAPOLATION_ORDER 3
EPS_DEFAULT 1.0E-12
&END QS
&POISSON
PERIODIC XYZ
&END POISSON
&SCF
...
&END SCF
&XC
...
&END XC
&LS_SCF
MAX_SCF 50
&END LS_SCF
&MGRID
CUTOFF [eV] 1.088455440974689736e+04
&END MGRID
&END DFT
&SUBSYS
&TOPOLOGY
&GENERATE
BONDLENGTH_MAX 1.15
BONDLENGTH_MIN 0.85
BONDPARM VDW
CREATE_MOLECULES T
&END GENERATE
&MOL_SET
&MOLECULE
CONNECTIVITY GENERATE
NMOL 215
&END MOLECULE
&END MOL_SET
&END TOPOLOGY
&KIND H
...
&END KIND
&KIND O
...
&END KIND
&COORD
...
&END COORD
&CELL
PERIODIC XYZ
...
&END CELL
&END SUBSYS
&END FORCE_EVAL
Thank you so much for any guidance you can give! I have been stuck on this
for quite some time now.
Best,
Sam
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