[CP2K-user] [CP2K:19894] FFTW_PLAN_TYPE PATIENT and EXHAUSTIVE not working
Léon Luntadila Lufungula
Leon.luntadilalufungula at uantwerpen.be
Mon Feb 12 09:42:16 UTC 2024
Dear all,
I've been running some AIMD calculations and am trying to speed up the
calculations a bit by playing with the FFTW_PLAN_TYPE option.
Unfortunately, only MEASURE and the default ESTIMATE are working. If I try
to set it to PATIENT (as recommended for long AIMD runs) or EXHAUSTIVE, the
calculation crashes almost immediately with the following error messages
(see also attached files):
[PATIENT]
...
corrupted double-linked list
corrupted double-linked list (not small)
cp2k.popt: malloc.c:4106: _int_malloc: Assertion `(unsigned long) (size) >=
(unsigned long) (nb)' failed.
Program received signal SIGABRT: Process abort signal.
...
[EXHAUSTIVE]
...
malloc_consolidate(): unaligned fastbin chunk detected
malloc_consolidate(): unaligned fastbin chunk detected
Program received signal SIGABRT: Process abort signal.
Backtrace for this error:
corrupted double-linked list
Program received signal SIGABRT: Process abort signal.
Backtrace for this error:
malloc_consolidate(): unaligned fastbin chunk detected
Program received signal SIGABRT: Process abort signal.
Backtrace for this error:
Program received signal SIGABRT: Process abort signal.
Backtrace for this error:
corrupted double-linked list
cp2k.popt: malloc.c:4106: _int_malloc: Assertion `(unsigned long) (size) >=
(unsigned long) (nb)' failed.
...
I'm running CP2K/2023.2-foss-2022a as compiled with Easybuild by our HPC
centre, but the same problems appear when I try the CP2K/2022.1-foss-2022a
version. However, when I run it with the CP2K/7.1-intel-2020a version which
is also available, both EXHAUSTIVE and PATIENT seem to be working
properly... Is this something that can be solved in some way or will this
require a different compilation of CP2K, possibly with the intel toolchain
instead of the foss toolchain?
Kind regards,
Léon
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