[CP2K-user] [CP2K:20976] Why are the minima and fes.dat generated by the graph program inconsistent?
'John' via cp2k
cp2k at googlegroups.com
Tue Dec 17 18:14:16 UTC 2024
To whom it may concern,
Why are the minima and fes.dat generated by the graph program inconsistent?
I am performing 2D metadynamics for a reaction. After generating the free
energy surface (FES) and locating the minima with the graph program
distributed with cp2k, I found the minima located by the graph program to
be inconsistent.
For example, the fes.dat generated with the following command has the
lowest energy point (2.6472065282, 0.1710029784) and an FES value of
-0.1132140742.
graph.psmp -cp2k -ndim 2 -ndw 1 2 -file multi-walker-mtd-1.restart
-find-minima
The graph program found the lowest energy minima at (2.647207, 0.222007 )
with an FES value of -0.105939. I would have expected a minimum with an FES
value less than or equal to -0.113240742 (the lowest free energy in
fes.dat).
How can I use the graph program to find the lowest energy minimum?
How can I be sure that the graph program has located all the relevant
minima on the FES?
I have attached the output from the graph program (fes.out), the free
energy surface file (fes.dat), and the input cp2k restart file used for
input to the graph program. Note that I have compressed fes.dat and the
restart file.
Thank you for your attention.
John J. Low
Argonne National Laboratory
--
You received this message because you are subscribed to the Google Groups "cp2k" group.
To unsubscribe from this group and stop receiving emails from it, send an email to cp2k+unsubscribe at googlegroups.com.
To view this discussion visit https://groups.google.com/d/msgid/cp2k/89a3112c-9b84-4cee-9851-9ddaeff15e2an%40googlegroups.com.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20241217/e9a85e66/attachment-0001.htm>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: multi-walker-mtd-1.restart.zip
Type: application/x-zip
Size: 326182 bytes
Desc: not available
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20241217/e9a85e66/attachment-0002.bin>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: fes.out
Type: application/octet-stream
Size: 1751 bytes
Desc: not available
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20241217/e9a85e66/attachment-0001.obj>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: fes.dat.zip
Type: application/x-zip
Size: 69274 bytes
Desc: not available
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20241217/e9a85e66/attachment-0003.bin>
More information about the CP2K-user
mailing list