[CP2K-user] Stillinger cluster criterion in GEMC simulations
Even Marius Nordhagen
even.n... at gmail.com
Fri May 21 10:44:54 UTC 2021
Dear CP2K experts,
I am currently trying to reproduce this article
<https://pubs.acs.org/doi/abs/10.1021/acs.jpcc.9b06348> [1], where the
authors use Monte Carlo simulations, and AVBMC steps in particular, to
build a water cluster from an (ideal) water reservoir.
Since CP2K is the only freely available package that I could find with
AVBMC implemented, I decided to give it a try. In other words, I am new to
the package.
In the gas reservoir there is no force between the molecules. In the box
where the water cluster is being built, the molecules are interacting with
a force-field (e.g. TIP3P). Only particles that belong to the cluster
should be accepted. We define a maximum allowed distance between the
particles in a cluster: If the distances between a particle A and all
particles in a cluster is larger than this maximum distance, the particle A
does not belong to the cluster (Stillinger cluster criterion). When moving
particles from the reservoir to the cluster, we want to reject all moves
where a particle is not being attached to the cluster.
So here comes my main question: Is it possible to define such an acceptance
criterion in CP2K?
I started from the CP2K GEMC tutorial <https://www.cp2k.org/howto:gemc>[2],
but cannot find a way to continue. I also have a question about the output
files. The trajectory files for the two boxes are both written to the file
mc_coordinates. When visualizing it in Ovito, it shows the two boxes every
other frame. I want a trajectory file for each box. I tried this:
&MOTION
&PRINT
&TRAJECTORY ON
FILENAME box1.trj
FORMAT XYZ
&END TRAJECTORY
&END PRINT
&END MOTION
but no box1.trj file was written.
I appreciate any help I can get, I feel quite lost at the moment.
Links:
[1] https://pubs.acs.org/doi/abs/10.1021/acs.jpcc.9b06348
[2] https://www.cp2k.org/howto:gemc
Best regards,
Even M. Nordhagen
PhD candidate in Computational Physics,
Department of Physics, University of Oslo
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