[CP2K-user] QMMM energy conservation problem
Бранислав Миловановић
dr.bra... at gmail.com
Fri Nov 27 19:26:15 UTC 2020
Dear cp2k users/developers,
I'm trying to simulate DNA guanine quadruplex using QMMM approach. MM force
field parameters are prepared with AmberTools20. QM part is constituted of
Na+ cation coordinated by 8 guanine molecules (so called G-octet), while
other nucleobases, counterions and solvating water molecules are treated
with MM.
System was previously equlibrated with NVT ensemble and MM approach with no
problem encountered. Also, when I try to run QM part of the system only
using same DFT settings as in the case of QMMM calculation I have no
problems.
However, when I try to run QMMM calculation under present setup (input
files in the attachment) I constantly get shift of the Cons Qty during my
run, for both NVE and NVT runs (graphs from my last attempt are in the
attachment).
I tried different calculation setup (different timestep, ewald summation
parms etc.) by looking to the previous topics here in the group but with no
success.
Maybe there is something trivial bothering me here, qmmm link settings or
similar...
I used IMOMM method for the link and also distributed charges across
neighbouring MM atoms to neutralize MM subsystem.
Can anybody help me with this?
Kind regards,
Branislav
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