[CP2K-user] Spikes in GAPW total electron density cube
Mayank Dodia
mayan... at gmail.com
Sat May 9 21:05:58 UTC 2020
Hi all,
I am trying to extract total electron density from a cluster of water
molecules in a QM/MM calculation and I am using 6-31G* all electron basis
to extract the total electron density cube of the water molecules in the QM
region. As you can see in the attached image, the electron density shows
"spikes". The description of the TOTAL_DENSITY keyword does gives the
warning, which says that:
"..NOTE: The total density in real space might exhibit unphysical features
like spikes due to the finite and thus truncated g vector expansion."
My question here is that is there any way by which I can reduce the
prevalence of spikes in the total electron density by fine tuning GAPW
parameters? I am currently using the following setup:
&QS
EPS_DEFAULT 1.0000000000000000E-10
EPSFIT 9.9999999999999995E-07
EPSISO 9.9999999999999998E-13
EPSRHO0 1.0000000000000000E-08
ALPHA0_HARD 1.0000000000000000E+01
MAP_CONSISTENT T
LMAXN1 6
LMAXN0 4
QUADRATURE GC_LOG
EXTRAPOLATION ASPC
EXTRAPOLATION_ORDER 4
METHOD GAPW
&END QS
&MGRID
CUTOFF 2.8000000000000000E+02
COMMENSURATE T
&END MGRID
&XC
DENSITY_CUTOFF 1.0000000000000000E-10
GRADIENT_CUTOFF 1.0000000000000000E-10
TAU_CUTOFF 1.0000000000000000E-10
&XC_GRID
XC_SMOOTH_RHO NN50
XC_DERIV SPLINE2_SMOOTH
&END XC_GRID
&XC_FUNCTIONAL NO_SHORTCUT
&PBE T
PARAMETRIZATION REVPBE
&END PBE
&END XC_FUNCTIONAL
&VDW_POTENTIAL
POTENTIAL_TYPE PAIR_POTENTIAL
&PAIR_POTENTIAL
R_CUTOFF 1.2500000000000009E+01
TYPE DFTD3
PARAMETER_FILE_NAME ./dftd3.dat
REFERENCE_FUNCTIONAL revPBE
CALCULATE_C9_TERM T
REFERENCE_C9_TERM T
LONG_RANGE_CORRECTION F
&END PAIR_POTENTIAL
&END VDW_POTENTIAL
&END XC
.....
&KIND H
BASIS_SET 6-31G*
POTENTIAL ALL
LEBEDEV_GRID 80
RADIAL_GRID 200
&END KIND
&KIND O
BASIS_SET 6-31G*
POTENTIAL ALL
LEBEDEV_GRID 80
RADIAL_GRID 200
&END KIND
Also if there is else I can do either remove the "spikes" fully from the
electron density cube, that would be really helpful as well.
Best Regards,
Mayank Dodia
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