[CP2K-user] There are three &COORD sections in MD restart file, what is the exact meaning about the 3 &COORD information. PLs help

Dr. Zhiyin Gan ganz... at gmail.com
Mon Jan 6 13:42:49 UTC 2020


Dar All :

In the  produced MD restart file as attached , there are three &COORD 
section  for  coordinate information as following . I do not know the exact 
meaning of these COORD sections and the exact differences. 
(1) &NOSE
           LENGTH  1
           YOSHIDA  3
           TIMECON     4.9999999999999991E+03
           MTS  2
           &COORD
                 4.6488645250930691E+00
           &END COORD
           &VELOCITY
                 6.9859645018225177E-06
           &END VELOCITY
           &MASS
                 2.4355948848856034E+09
           &END MASS
           &FORCE
                -1.5610552870621715E-11
           &END FORCE
         &END NOSE
       &END THERMOSTAT
     &END BAROSTAT
     &THERMOSTAT
       REGION  MOLECULE
       &NOSE
(2)  MTS  2
         &COORD
               1.1967775933536187E+00   -2.3776350897743899E+00   
-1.3400288103125264E+00   -2.3225584678295794E-01 \
              -1.5573576025279880E+00   -1.6014290821464181E+00   
-1.7091883122009159E+00   -1.9145429051270391E+00   -2.1826934753057894E+00 
\
               1.9686310284792923E+00   -2.9711318943509348E+00    
1.8370002035703364E-01    1.6585022022466931E+00   -1.8176710530555831E+00 \
              -3.6180813203332624E-01   -1.5889176800617993E-01   
-1.9039786604987554E+00    8.1424864162831723E-01   -9.3419893839955637E-01 
\
              -2.0614695968571088E+00    3.4262856178321571E-01   
-3.2744237853314191E+00   -2.6789399060929564E+00   -2.0281680501952128E+00 
\
              -2.7231974829348458E+00    4.5090927390620161E-01   
-2.4695541312037768E+00   -1.2551632278424238E+00    1.8828437202304089E+00 
\
              -1.8721709128493151E+00   -1.7072079281172656E+00    
1.3397093148999621E+00   -1.6636350305763012E+00    7.5343538587200609E-02 \
              -1.4881701303382868E+00    7.5241915040427010E-01   
-9.8573729884920780E-01   -2.6978502024613848E-01   -2.5918180329954614E+00 
\
              -2.0341557652144746E+00   -1.3103955852591966E+00    
2.0623162187307864E-01   -1.2531778752562310E+00    1.6466975566490234E+00 \
              -8.5635760030672170E-01    1.6163758150911798E+00   
-3.1050535969317672E-01   -5.0007839187654402E-01   -1.1743908732155326E+00 
\
...........................................................................................
(3)&SUBSYS
     &CELL
       A     2.7743781840104663E+01    3.6089023808729054E-01    
3.1248562515266137E-01
       B     1.6144435983284296E+01    2.2275774374134709E+01    
1.9996653621544175E-01
       C     1.6183384942233495E+01    8.2711881533040508E+00    
2.0912506110239423E+01
       MULTIPLE_UNIT_CELL  1 1 1
     &END CELL
     &COORD
AL   -2.0003374238350180E+01   -1.0535520680697278E+01   
-7.2414954646386107E+00
AL   -1.6774150197327071E+01   -9.2554835069871437E+00   
-3.0267633545488160E+00
AL   -1.3637181522679127E+01   -7.1935439468359430E+00    
1.1523055523429551E+00
AL   -1.0466920386272063E+01   -4.9180953365793814E+00    
5.6382941178773605E+00
AL   -6.8060719851795088E+00   -3.7822274552100410E+00    
1.0081217146110680E+01
AL   -1.6798506019584238E+01   -5.5581002540992621E+00   
-6.8711369205315149E+00
AL   -1.3279440713651626E+01   -4.1785257655886916E+00   
-3.1323657276321573E+00
AL   -1.0472078800083443E+01   -2.6773622711221918E+00    
1.8752833353225189E+00
.......................................................................

The complete restart file as the followings:


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