[CP2K-user] There are three &COORD sections in MD restart file, what is the exact meaning about the 3 &COORD information. PLs help
Dr. Zhiyin Gan
ganz... at gmail.com
Mon Jan 6 13:42:49 UTC 2020
Dar All :
In the produced MD restart file as attached , there are three &COORD
section for coordinate information as following . I do not know the exact
meaning of these COORD sections and the exact differences.
(1) &NOSE
LENGTH 1
YOSHIDA 3
TIMECON 4.9999999999999991E+03
MTS 2
&COORD
4.6488645250930691E+00
&END COORD
&VELOCITY
6.9859645018225177E-06
&END VELOCITY
&MASS
2.4355948848856034E+09
&END MASS
&FORCE
-1.5610552870621715E-11
&END FORCE
&END NOSE
&END THERMOSTAT
&END BAROSTAT
&THERMOSTAT
REGION MOLECULE
&NOSE
(2) MTS 2
&COORD
1.1967775933536187E+00 -2.3776350897743899E+00
-1.3400288103125264E+00 -2.3225584678295794E-01 \
-1.5573576025279880E+00 -1.6014290821464181E+00
-1.7091883122009159E+00 -1.9145429051270391E+00 -2.1826934753057894E+00
\
1.9686310284792923E+00 -2.9711318943509348E+00
1.8370002035703364E-01 1.6585022022466931E+00 -1.8176710530555831E+00 \
-3.6180813203332624E-01 -1.5889176800617993E-01
-1.9039786604987554E+00 8.1424864162831723E-01 -9.3419893839955637E-01
\
-2.0614695968571088E+00 3.4262856178321571E-01
-3.2744237853314191E+00 -2.6789399060929564E+00 -2.0281680501952128E+00
\
-2.7231974829348458E+00 4.5090927390620161E-01
-2.4695541312037768E+00 -1.2551632278424238E+00 1.8828437202304089E+00
\
-1.8721709128493151E+00 -1.7072079281172656E+00
1.3397093148999621E+00 -1.6636350305763012E+00 7.5343538587200609E-02 \
-1.4881701303382868E+00 7.5241915040427010E-01
-9.8573729884920780E-01 -2.6978502024613848E-01 -2.5918180329954614E+00
\
-2.0341557652144746E+00 -1.3103955852591966E+00
2.0623162187307864E-01 -1.2531778752562310E+00 1.6466975566490234E+00 \
-8.5635760030672170E-01 1.6163758150911798E+00
-3.1050535969317672E-01 -5.0007839187654402E-01 -1.1743908732155326E+00
\
...........................................................................................
(3)&SUBSYS
&CELL
A 2.7743781840104663E+01 3.6089023808729054E-01
3.1248562515266137E-01
B 1.6144435983284296E+01 2.2275774374134709E+01
1.9996653621544175E-01
C 1.6183384942233495E+01 8.2711881533040508E+00
2.0912506110239423E+01
MULTIPLE_UNIT_CELL 1 1 1
&END CELL
&COORD
AL -2.0003374238350180E+01 -1.0535520680697278E+01
-7.2414954646386107E+00
AL -1.6774150197327071E+01 -9.2554835069871437E+00
-3.0267633545488160E+00
AL -1.3637181522679127E+01 -7.1935439468359430E+00
1.1523055523429551E+00
AL -1.0466920386272063E+01 -4.9180953365793814E+00
5.6382941178773605E+00
AL -6.8060719851795088E+00 -3.7822274552100410E+00
1.0081217146110680E+01
AL -1.6798506019584238E+01 -5.5581002540992621E+00
-6.8711369205315149E+00
AL -1.3279440713651626E+01 -4.1785257655886916E+00
-3.1323657276321573E+00
AL -1.0472078800083443E+01 -2.6773622711221918E+00
1.8752833353225189E+00
.......................................................................
The complete restart file as the followings:
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