[CP2K-user] [CP2K:14361] CP2K-7.1 Toolchain crash at ELPA instalation
Tiziano Müller
tiziano... at chem.uzh.ch
Wed Dec 9 21:24:51 UTC 2020
Hi Krzysztof,
I assume you used the `ssmp` (or the deprecated `sopt`) VERSION?
SIRIUS and ELPA are only available when built with MPI support.
So, you have to run:
make ARCH=local VERSION=psmp
Best,
Tiziano
On 12/9/20 7:19 PM, Krzysztof Kolman wrote:
> Hi Tiziano,
>
> Thank you for your help! This time it worked :) I have one more
> question. After the compilation I performed the regression testing. In
> the beginning I got following message:
>
> CP2K supports: cp2kflags: omp libint fftw3 libxc acc pw_cuda xsmm
> dbcsr_acc spglib libvori libbqb grid_cuda
> Skipping QS/regtest-cdft-hirshfeld-2 : missing required feature : parallel
> Skipping QS/regtest-cdft-hirshfeld-2 : missing required feature : mpiranks>1
> Skipping SIRIUS/regtest-1 : missing required feature : sirius
> Skipping QS/regtest-elpa-2 : missing required feature : elpa
> Skipping QMMM/QS/regtest-cdft : missing required feature : parallel
> Skipping QMMM/QS/regtest-cdft : missing required feature :
> mpiranks==2||mpiranks==4||mpiranks==6||mpiranks==16||mpiranks==24
> Skipping QS/regtest-rma : missing required feature : mpi3
> Skipping QS/regtest-rma : missing required feature : mpiranks==4
> Skipping QS/regtest-cdft-3 : missing required feature : parallel
> Skipping QS/regtest-cdft-3 : missing required feature :
> mpiranks==2||mpiranks==4||mpiranks==6||mpiranks==16||mpiranks==24
> Skipping QS/regtest-pexsi : missing required feature : pexsi
> Skipping QS/regtest-rma-3D : missing required feature : mpi3
> Skipping QS/regtest-rma-3D : missing required feature : mpiranks==8
> Skipping TMC/regtest_ana_on_the_fly : missing required feature : parallel
> Skipping TMC/regtest_ana_on_the_fly : missing required feature : mpiranks>2
> Skipping TMC/regtest : missing required feature : parallel
> Skipping TMC/regtest : missing required feature : mpiranks>1
> Skipping QS/regtest-elpa-qr : missing required feature : elpa
> Skipping TMC/regtest_ana_post_proc : missing required feature : parallel
> Skipping TMC/regtest_ana_post_proc : missing required feature : mpiranks>1
> Skipping QS/regtest-elpa : missing required feature : elpa
> Skipping Fist/regtest-quip : missing required feature : quip
> Skipping Fist/regtest-plumed2 : missing required feature : plumed2
>
> Here it claims that ELPA and SIRIUS are missing. Do you know maybe why?
>
> Best regards,
> Krzysztof
>
> On Wednesday, December 9, 2020 at 4:14:07 PM UTC+1
> tiz... at chem.uzh.ch wrote:
>
> Hi Krzysztof,
>
> please use the latest git-master of CP2K if you want to try out a
> CUDA-enabled ELPA. In that version you should not only be able to build
> ELPA with support for a CUDA-kernel, but CP2K should actually be
> able to
> use it.
>
> Best regards,
> Tiziano
>
>
> On 12/9/20 12:15 PM, Krzysztof Kolman wrote:
> > Hello,
> >
> > I have encounter a problem while trying to compile cp2k at Ubuntu
> 20.04
> > with CUDA support. When I use following toolchain command:
> > ./install_cp2k_toolchain.sh --with-libxsmm=install
> > --with-openblas=install --with-fftw=install --with-reflapack=no
> > --enable-cuda --enable-omp --gpu-ver=V100 --with-cmake=system
> > --with-openmpi=install
> >
> > I get such error:
> > ==================== Installing ELPA ====================
> > elpa-2019.05.001.tar.gz is found
> > Installing from scratch into
> > /cp2k-7.1/tools/toolchain/install/elpa-2019.05.001
> > ERROR: (./scripts/install_elpa.sh, line 103) Non-zero exit code
> detected.
> >
> > From the make.log located at /build/elpa-2019.05.00/obj_no_thread
> I can
> > see that nvcc crashes:
> > nvcc fatal : Unknown option 'Wl,-rpath'
> >
> > Please find attached the make. log file as well as config.log and
> > configure.log located at /build/elpa-2019.05.00/obj_no_threa.
> >
> > I think it is also worth to mention that I manage to compile cp2k
> with
> > flag --with-elpa=no.
> >
> > Thank you in advance for your help!
> >
> > Best regards,
> > Krzysztof
> >
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>
> --
> Tiziano Müller
> University of Zurich
> Department of Chemistry
> Winterthurerstrasse 190
> CH-8057 Zürich
>
> Tel: +41 44 63 54234
> www.chem.uzh.ch <http://www.chem.uzh.ch>
> tiz... at chem.uzh.ch
>
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--
Tiziano Müller
University of Zurich
Department of Chemistry
Winterthurerstrasse 190
CH-8057 Zürich
Tel: +41 44 63 54234
www.chem.uzh.ch
tiziano... at chem.uzh.ch
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