[CP2K-user] CP2K-7.1 compiling error:vdwxc_init_mpi - not found
HB H
haibe... at gmail.com
Mon Aug 31 07:00:33 UTC 2020
Dear users and develpers,
I enconutered an error while I was compiling CP2K-7.1 with
"install_cp2k_toolchain.sh" script. (GNU+intel MKL+openmpi)
The compiling command is:
./install_cp2k_toolchain.sh \
--math-mode=mkl \
--with-openmpi=install \
--with-scalapack=no
When it comes to the SIRIUS part, the error shows up like this:
==================== Installing SIRIUS ====================
sirius_6.4.1.tar.gz is found
Installing from scratch into
/opt/cp2k-7.1/tools/toolchain/install/sirius-6.4.1
ERROR: (./scripts/install_sirius.sh, line 130) Non-zero exit code detected.
...
The *.log files and all relevant files are attached. It seems that
something was wrong with "vdwxc_init_mpi", because it said in complie.log
and CMakeError.log that "Looking for vdwxc_init_mpi - not found".
*This is the last part of compile.log:*
...
-- Checking for one of the modules 'elpa;elpa_openmp'
-- Found Elpa:
/opt/cp2k-7.1/tools/toolchain/install/elpa-2019.05.001/lib/libelpa.a
-- Checking for one of the modules 'libvdwxc>=0.3.0'
-- Looking for vdwxc_init_mpi
-- Looking for vdwxc_init_mpi - not found
CMake Error at
/opt/cp2k-7.1/tools/toolchain/install/cmake-3.15.1/share/cmake-3.15/Modules/FindPackageHandleStandardArgs.cmake:137
(message):
Could NOT find LibVDWXC (missing: LIBVDWXC_LIBRARIES) (Required is at
least
version "0.3.0")
Call Stack (most recent call first):
/opt/cp2k-7.1/tools/toolchain/install/cmake-3.15.1/share/cmake-3.15/Modules/FindPackageHandleStandardArgs.cmake:378
(_FPHSA_FAILURE_MESSAGE)
cmake/modules/FindLibVDWXC.cmake:35 (find_package_handle_standard_args)
CMakeLists.txt:198 (find_package)
...
*This is the last part of CMakeError.log:*
...
Linking C executable cmTC_1450c
/opt/cp2k-7.1/tools/toolchain/install/cmake-3.15.1/bin/cmake -E
cmake_link_script CMakeFiles/cmTC_1450c.dir/link.txt --verbose=1
/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpicc -O2
-ftree-vectorize -g -fno-omit-frame-pointer -march=native -m64
CMakeFiles/cmTC_1450c.dir/CheckSymbolExists.c.o -o cmTC_1450c
CMakeFiles/cmTC_1450c.dir/CheckSymbolExists.c.o: In function `main':
/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp/CheckSymbolExists.c:8:
undefined reference to `vdwxc_init_mpi'
collect2: error: ld returned 1 exit status
gmake[1]: *** [CMakeFiles/cmTC_1450c.dir/build.make:87: cmTC_1450c] Error 1
gmake[1]: Leaving directory
'/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp'
gmake: *** [Makefile:121: cmTC_1450c/fast] Error 2
File
/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp/CheckSymbolExists.c:
/* */
#include
</opt/cp2k-7.1/tools/toolchain/install/libvdwxc-0.4.0/include/vdwxc_mpi.h>
int main(int argc, char** argv)
{
(void)argv;
#ifndef vdwxc_init_mpi
return ((int*)(&vdwxc_init_mpi))[argc];
#else
(void)argc;
return 0;
#endif
}
Plz see more details in the attachments.
My system is Centos8: “Linux version 4.18.0-193.14.2.el8_2.x86_64 (gcc
version 8.3.1 20191121 (Red Hat 8.3.1-5) (GCC))”.
Please let me if you guys have any thoughts, or should I provide more
information.
Thanks for your time!
Haibei
-------------- next part --------------
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-------------- next part --------------
Determining if the vdwxc_init_mpi exist failed with the following output:
Change Dir: /opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp
Run Build Command(s):/usr/bin/gmake cmTC_117a3/fast && /usr/bin/gmake -f CMakeFiles/cmTC_117a3.dir/build.make CMakeFiles/cmTC_117a3.dir/build
gmake[1]: Entering directory '/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp'
Building C object CMakeFiles/cmTC_117a3.dir/CheckSymbolExists.c.o
/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpicc -O2 -ftree-vectorize -g -fno-omit-frame-pointer -march=native -m64 -o CMakeFiles/cmTC_117a3.dir/CheckSymbolExists.c.o -c /opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp/CheckSymbolExists.c
Linking C executable cmTC_117a3
/opt/cp2k-7.1/tools/toolchain/install/cmake-3.15.1/bin/cmake -E cmake_link_script CMakeFiles/cmTC_117a3.dir/link.txt --verbose=1
/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpicc -O2 -ftree-vectorize -g -fno-omit-frame-pointer -march=native -m64 CMakeFiles/cmTC_117a3.dir/CheckSymbolExists.c.o -o cmTC_117a3
CMakeFiles/cmTC_117a3.dir/CheckSymbolExists.c.o: In function `main':
/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp/CheckSymbolExists.c:8: undefined reference to `vdwxc_init_mpi'
collect2: error: ld returned 1 exit status
gmake[1]: *** [CMakeFiles/cmTC_117a3.dir/build.make:87: cmTC_117a3] Error 1
gmake[1]: Leaving directory '/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp'
gmake: *** [Makefile:121: cmTC_117a3/fast] Error 2
File /opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp/CheckSymbolExists.c:
/* */
#include </opt/cp2k-7.1/tools/toolchain/install/libvdwxc-0.4.0/include/vdwxc_mpi.h>
int main(int argc, char** argv)
{
(void)argv;
#ifndef vdwxc_init_mpi
return ((int*)(&vdwxc_init_mpi))[argc];
#else
(void)argc;
return 0;
#endif
}
-------------- next part --------------
The system is: Linux - 4.18.0-193.14.2.el8_2.x86_64 - x86_64
Compiling the C compiler identification source file "CMakeCCompilerId.c" succeeded.
Compiler: /opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpicc
Build flags: -O2;-ftree-vectorize;-g;-fno-omit-frame-pointer;-march=native
Id flags:
The output was:
0
Compilation of the C compiler identification source "CMakeCCompilerId.c" produced "a.out"
The C compiler identification is GNU, found in "/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/3.15.1/CompilerIdC/a.out"
Compiling the CXX compiler identification source file "CMakeCXXCompilerId.cpp" succeeded.
Compiler: /opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpic++
Build flags: -O2;-ftree-vectorize;-g;-fno-omit-frame-pointer;-march=native
Id flags:
The output was:
0
Compilation of the CXX compiler identification source "CMakeCXXCompilerId.cpp" produced "a.out"
The CXX compiler identification is GNU, found in "/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/3.15.1/CompilerIdCXX/a.out"
Determining if the C compiler works passed with the following output:
Change Dir: /opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp
Run Build Command(s):/usr/bin/gmake cmTC_f2742/fast && /usr/bin/gmake -f CMakeFiles/cmTC_f2742.dir/build.make CMakeFiles/cmTC_f2742.dir/build
gmake[1]: Entering directory '/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp'
Building C object CMakeFiles/cmTC_f2742.dir/testCCompiler.c.o
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Linking C executable cmTC_f2742
/opt/cp2k-7.1/tools/toolchain/install/cmake-3.15.1/bin/cmake -E cmake_link_script CMakeFiles/cmTC_f2742.dir/link.txt --verbose=1
/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpicc -O2 -ftree-vectorize -g -fno-omit-frame-pointer -march=native CMakeFiles/cmTC_f2742.dir/testCCompiler.c.o -o cmTC_f2742
gmake[1]: Leaving directory '/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp'
Detecting C compiler ABI info compiled with the following output:
Change Dir: /opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp
Run Build Command(s):/usr/bin/gmake cmTC_bae83/fast && /usr/bin/gmake -f CMakeFiles/cmTC_bae83.dir/build.make CMakeFiles/cmTC_bae83.dir/build
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Building C object CMakeFiles/cmTC_bae83.dir/CMakeCCompilerABI.c.o
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collapse library dir [/opt/cp2k-7.1/tools/toolchain/install/spglib-1.12.2/lib] ==> [/opt/cp2k-7.1/tools/toolchain/install/spglib-1.12.2/lib]
collapse library dir [/opt/cp2k-7.1/tools/toolchain/install/gsl-2.5/lib] ==> [/opt/cp2k-7.1/tools/toolchain/install/gsl-2.5/lib]
collapse library dir [/opt/cp2k-7.1/tools/toolchain/install/elpa-2019.05.001/lib] ==> [/opt/cp2k-7.1/tools/toolchain/install/elpa-2019.05.001/lib]
collapse library dir [/opt/cp2k-7.1/tools/toolchain/install/libxsmm-1.14/lib] ==> [/opt/cp2k-7.1/tools/toolchain/install/libxsmm-1.14/lib]
collapse library dir [/opt/cp2k-7.1/tools/toolchain/install/libxc-4.3.4/lib] ==> [/opt/cp2k-7.1/tools/toolchain/install/libxc-4.3.4/lib]
collapse library dir [/opt/cp2k-7.1/tools/toolchain/install/libint-v2.6.0-cp2k-lmax-5/lib] ==> [/opt/cp2k-7.1/tools/toolchain/install/libint-v2.6.0-cp2k-lmax-5/lib]
collapse library dir [/opt/cp2k-7.1/tools/toolchain/install/SpFFT-0.9.8/lib] ==> [/opt/cp2k-7.1/tools/toolchain/install/SpFFT-0.9.8/lib]
collapse library dir [/opt/cp2k-7.1/tools/toolchain/install/fftw-3.3.8/lib] ==> [/opt/cp2k-7.1/tools/toolchain/install/fftw-3.3.8/lib]
collapse library dir [/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/lib] ==> [/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/lib]
collapse library dir [/opt/intel/compilers_and_libraries_2018.0.128/linux/tbb/lib/intel64_lin/gcc4.7] ==> [/opt/intel/compilers_and_libraries_2018.0.128/linux/tbb/lib/intel64_lin/gcc4.7]
collapse library dir [/opt/intel/compilers_and_libraries_2018.0.128/linux/compiler/lib/intel64_lin] ==> [/opt/intel/compilers_and_libraries_2018.0.128/linux/compiler/lib/intel64_lin]
collapse library dir [/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64_lin] ==> [/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64_lin]
collapse library dir [/opt/intel/compilers_and_libraries_2018.0.128/linux/tbb/lib/intel64_lin/gcc4.7] ==> [/opt/intel/compilers_and_libraries_2018.0.128/linux/tbb/lib/intel64_lin/gcc4.7]
collapse library dir [/opt/intel/compilers_and_libraries_2018.0.128/linux/compiler/lib/intel64_lin] ==> [/opt/intel/compilers_and_libraries_2018.0.128/linux/compiler/lib/intel64_lin]
collapse library dir [/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64_lin] ==> [/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64_lin]
collapse library dir [/usr/lib/gcc/x86_64-redhat-linux/8/../../..] ==> [/usr/lib]
implicit libs: [mpi;stdc++;m;gcc_s;gcc;pthread;c;gcc_s;gcc]
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implicit fwks: []
Compiling the Fortran compiler identification source file "CMakeFortranCompilerId.F" succeeded.
Compiler: /usr/bin/gfortran
Build flags: -O2;-ftree-vectorize;-g;-fno-omit-frame-pointer;-march=native
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Driving: /usr/bin/gfortran -O2 -ftree-vectorize -g -fno-omit-frame-pointer -march=native -v CMakeFortranCompilerId.F -l gfortran -l m -shared-libgcc
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GNU Fortran (GCC) version 8.3.1 20191121 (Red Hat 8.3.1-5) (x86_64-redhat-linux)
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ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/8/include-fixed"
ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/8/../../../../x86_64-redhat-linux/include"
ignoring duplicate directory "/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/include"
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GNU Fortran2008 (GCC) version 8.3.1 20191121 (Red Hat 8.3.1-5) (x86_64-redhat-linux)
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Compilation of the Fortran compiler identification source "CMakeFortranCompilerId.F" produced "a.out"
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Change Dir: /opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp
Run Build Command(s):/usr/bin/gmake cmTC_1fac9/fast && /usr/bin/gmake -f CMakeFiles/cmTC_1fac9.dir/build.make CMakeFiles/cmTC_1fac9.dir/build
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gmake[1]: Leaving directory '/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp'
Detecting Fortran compiler ABI info compiled with the following output:
Change Dir: /opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeTmp
Run Build Command(s):/usr/bin/gmake cmTC_c1bc0/fast && /usr/bin/gmake -f CMakeFiles/cmTC_c1bc0.dir/build.make CMakeFiles/cmTC_c1bc0.dir/build
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Determining if the Fortran compiler supports Fortran 90 passed with the following output:
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# This is the CMakeCache file.
# For build in directory: /opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build
# It was generated by CMake: /opt/cp2k-7.1/tools/toolchain/install/cmake-3.15.1/bin/cmake
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//build doxygen doc
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//Path to a program.
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CMAKE_CXXFLAGS_RELEASE:UNINITIALIZED=-O3 -DNDEBUG -mtune=native -ftree-loop-vectorize -m64 -I/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/include -I/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/include/fftw
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CMAKE_CXX_COMPILER:STRING=/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpic++
//A wrapper around 'ar' adding the appropriate '--plugin' option
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//A wrapper around 'ranlib' adding the appropriate '--plugin' option
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CREATE_FORTRAN_BINDINGS:BOOL=ON
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CREATE_PYTHON_MODULE:BOOL=OFF
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DEBUG_MEMORY_POOL:BOOL=OFF
//Path to a file.
ELPA_INCLUDE_DIR:PATH=/opt/cp2k-7.1/tools/toolchain/install/elpa-2019.05.001/include/elpa-2019.05.001/elpa
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//The target GPU architecture; one of {none,P100,V100,G10x0}
GPU_MODEL:STRING=none
//Path to a library.
GSL_CBLAS_LIBRARY:FILEPATH=/opt/cp2k-7.1/tools/toolchain/install/gsl-2.5/lib/libgslcblas.so
//Path to a library.
GSL_CBLAS_LIBRARY_DEBUG:FILEPATH=/opt/cp2k-7.1/tools/toolchain/install/gsl-2.5/lib/libgslcblas.so
//Path to a file.
GSL_INCLUDE_DIR:PATH=/opt/cp2k-7.1/tools/toolchain/install/gsl-2.5/include
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GSL_ROOT_DIR:STRING=/opt/cp2k-7.1/tools/toolchain/install/gsl-2.5
//HDF5 C Wrapper compiler. Used only to detect HDF5 compile flags.
HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/opt/cp2k-7.1/tools/toolchain/install/hdf5-1.10.4/bin/h5cc
//Path to a library.
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//Path to a library.
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//Path to a library.
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//The directory containing a CMake configuration file for HDF5.
HDF5_DIR:PATH=HDF5_DIR-NOTFOUND
//spglib include directory
LIBSPG_INCLUDE_DIR:PATH=/opt/cp2k-7.1/tools/toolchain/install/spglib-1.12.2/include
//spglib libraries list
LIBSPG_LIBRARIES:FILEPATH=/opt/cp2k-7.1/tools/toolchain/install/spglib-1.12.2/lib/libsymspg.so
//vdwxc include directory
LIBVDWXC_INCLUDE_DIR:PATH=/opt/cp2k-7.1/tools/toolchain/install/libvdwxc-0.4.0/include
//vdwxc libraries list
LIBVDWXC_LIBRARIES:FILEPATH=LIBVDWXC_LIBRARIES-NOTFOUND
//Path to a file.
LIBXC_INCLUDE_DIR:PATH=/opt/cp2k-7.1/tools/toolchain/install/libxc-4.3.4/include
//libxc libraries list
LIBXC_LIBRARIES:FILEPATH=/opt/cp2k-7.1/tools/toolchain/install/libxc-4.3.4/lib/libxc.a
//Path to a library.
MKL_BLACS_LIBRARY:FILEPATH=/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64/libmkl_blacs_intelmpi_lp64.so
//Path to a library.
MKL_CORE_LIBRARY:FILEPATH=/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64/libmkl_core.so
//Path to a library.
MKL_DEF_LIBRARY:FILEPATH=/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64/libmkl_def.so
//Path to a file.
MKL_INCLUDE_DIR:PATH=/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/include
//Path to a library.
MKL_INTERFACE_LIBRARY:FILEPATH=/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64/libmkl_intel_lp64.so
//Path to a library.
MKL_SCALAPACK_LIBRARY:FILEPATH=/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64/libmkl_scalapack_lp64.so
//Path to a library.
MKL_SEQUENTIAL_LAYER_LIBRARY:FILEPATH=/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64/libmkl_sequential.so
//Path to a library.
MKL_THREAD_LIBRARY:FILEPATH=/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64/libmkl_gnu_thread.so
//Executable for running MPI programs.
MPIEXEC_EXECUTABLE:FILEPATH=/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpiexec
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MPIEXEC_MAX_NUMPROCS:STRING=36
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//MPI compiler for C
MPI_C_COMPILER:FILEPATH=/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpicc
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//MPI Fortran compilation options
MPI_Fortran_COMPILE_OPTIONS:STRING=-pthread
//Path to a file.
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MPI_Fortran_LINK_FLAGS:STRING=-Wl,-rpath -Wl,/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/lib -Wl,--enable-new-dtags -pthread
//Path to a file.
MPI_Fortran_MODULE_DIR:PATH=/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/lib
//Location of the mpi library for MPI
MPI_mpi_LIBRARY:FILEPATH=/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/lib/libmpi.so
//Location of the mpi_mpifh library for MPI
MPI_mpi_mpifh_LIBRARY:FILEPATH=/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/lib/libmpi_mpifh.so
//Location of the mpi_usempi_ignore_tkr library for MPI
MPI_mpi_usempi_ignore_tkr_LIBRARY:FILEPATH=/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/lib/libmpi_usempi_ignore_tkr.so
//Location of the mpi_usempif08 library for MPI
MPI_mpi_usempif08_LIBRARY:FILEPATH=/opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/lib/libmpi_usempif08.so
//CXX compiler flags for OpenMP parallelization
OpenMP_CXX_FLAGS:STRING=-fopenmp
//CXX compiler libraries for OpenMP parallelization
OpenMP_CXX_LIB_NAMES:STRING=gomp
//C compiler flags for OpenMP parallelization
OpenMP_C_FLAGS:STRING=-fopenmp
//C compiler libraries for OpenMP parallelization
OpenMP_C_LIB_NAMES:STRING=gomp
//Fortran compiler flags for OpenMP parallelization
OpenMP_Fortran_FLAGS:STRING=-fopenmp
//Fortran compiler libraries for OpenMP parallelization
OpenMP_Fortran_LIB_NAMES:STRING=gomp;pthread
//Path to the gomp library for OpenMP
OpenMP_gomp_LIBRARY:FILEPATH=/usr/lib/gcc/x86_64-redhat-linux/8/libgomp.so
//Path to the pthread library for OpenMP
OpenMP_pthread_LIBRARY:FILEPATH=/usr/lib64/libpthread.so
//pkg-config executable
PKG_CONFIG_EXECUTABLE:FILEPATH=/usr/bin/pkg-config
//Use Python 2.7
PYTHON2:STRING=OFF
//Path to a program.
Python3_EXECUTABLE:FILEPATH=/usr/bin/python3.6
//Value Computed by CMake
SIRIUS_BINARY_DIR:STATIC=/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build
//Value Computed by CMake
SIRIUS_SOURCE_DIR:STATIC=/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1
//No help, variable specified on the command line.
SpFFT_DIR:UNINITIALIZED=/opt/cp2k-7.1/tools/toolchain/install/SpFFT-0.9.8/lib/cmake/SpFFT
//use LAPACK/SCALAPACK from Cray LIBSCI
USE_CRAY_LIBSCI:BOOL=OFF
//use CUDA
USE_CUDA:BOOL=OFF
//use scalapack
USE_ELPA:BOOL=ON
//use MAGMA
USE_MAGMA:BOOL=OFF
//use memory pool
USE_MEMORY_POOL:BOOL=ON
//use Intel MKL
USE_MKL:BOOL=ON
//use Nvidia profiling tools library
USE_NVTX:BOOL=OFF
//use OpenMP
USE_OPENMP:BOOL=ON
//use ROCM AMD GPU code
USE_ROCM:BOOL=OFF
//use scalapack
USE_SCALAPACK:BOOL=ON
//measure execution of functions with timer
USE_TIMER:BOOL=ON
//use libvdwxc for van der Walls corrections
USE_VDWXC:BOOL=ON
//Path to a library.
pkgcfg_lib_GSL_gsl:FILEPATH=pkgcfg_lib_GSL_gsl-NOTFOUND
//Path to a library.
pkgcfg_lib_GSL_gslcblas:FILEPATH=pkgcfg_lib_GSL_gslcblas-NOTFOUND
//Path to a library.
pkgcfg_lib_GSL_m:FILEPATH=/usr/lib64/libm.so
//Path to a library.
pkgcfg_lib__LIBVDWXC_fftw3:FILEPATH=pkgcfg_lib__LIBVDWXC_fftw3-NOTFOUND
//Path to a library.
pkgcfg_lib__LIBVDWXC_vdwxc:FILEPATH=pkgcfg_lib__LIBVDWXC_vdwxc-NOTFOUND
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__pkg_config_checked__ELPA:INTERNAL=1
__pkg_config_checked__LIBVDWXC:INTERNAL=1
__pkg_config_checked__LIBXC:INTERNAL=1
//ADVANCED property for variable: pkgcfg_lib_GSL_gsl
pkgcfg_lib_GSL_gsl-ADVANCED:INTERNAL=1
//ADVANCED property for variable: pkgcfg_lib_GSL_gslcblas
pkgcfg_lib_GSL_gslcblas-ADVANCED:INTERNAL=1
//ADVANCED property for variable: pkgcfg_lib_GSL_m
pkgcfg_lib_GSL_m-ADVANCED:INTERNAL=1
//ADVANCED property for variable: pkgcfg_lib__LIBVDWXC_fftw3
pkgcfg_lib__LIBVDWXC_fftw3-ADVANCED:INTERNAL=1
//ADVANCED property for variable: pkgcfg_lib__LIBVDWXC_vdwxc
pkgcfg_lib__LIBVDWXC_vdwxc-ADVANCED:INTERNAL=1
prefix_result:INTERNAL=/opt/cp2k-7.1/tools/toolchain/install/libvdwxc-0.4.0/lib
-------------- next part --------------
-- The C compiler identification is GNU 8.3.1
-- The CXX compiler identification is GNU 8.3.1
-- Check for working C compiler: /opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpicc
-- Check for working C compiler: /opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpicc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpic++
-- Check for working CXX compiler: /opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpic++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- The Fortran compiler identification is GNU 8.3.1
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Found Python3: /usr/bin/python3.6 (found version "3.6.8") found components: Interpreter
-- Found MPI_C: /opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpicc (found version "3.1")
-- Found MPI_CXX: /opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/bin/mpic++ (found version "3.1")
-- Found MPI_Fortran: /opt/cp2k-7.1/tools/toolchain/install/openmpi-4.0.1/lib/libmpi_usempif08.so (found version "3.1")
-- Found MPI: TRUE (found version "3.1")
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.4.2")
-- Found GSL: /opt/cp2k-7.1/tools/toolchain/install/gsl-2.5/include (found version "2.5")
MKL using shared libs!
-- Found MKL: /opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64/libmkl_core.so;/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64/libmkl_blacs_intelmpi_lp64.so;/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64/libmkl_scalapack_lp64.so;/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64/libmkl_intel_lp64.so;/opt/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64/libmkl_gnu_thread.so
-- Found OpenMP_C: -fopenmp (found version "4.5")
-- Found OpenMP_CXX: -fopenmp (found version "4.5")
-- Found OpenMP_Fortran: -fopenmp (found version "4.5")
-- Found OpenMP: TRUE (found version "4.5")
-- Checking for one of the modules 'libxc>=3.0.0'
-- Found LibXC: /opt/cp2k-7.1/tools/toolchain/install/libxc-4.3.4/lib/libxc.a (Required is at least version "3.0.0")
-- Found LibSPG: /opt/cp2k-7.1/tools/toolchain/install/spglib-1.12.2/lib/libsymspg.so
-- HDF5: Using hdf5 compiler wrapper to determine C configuration
-- Found HDF5: /opt/cp2k-7.1/tools/toolchain/install/hdf5-1.10.4/lib/libhdf5.so;/usr/lib64/libdl.so;/usr/lib64/libm.so (found version "1.10.4") found components: C
-- Checking for one of the modules 'elpa;elpa_openmp'
-- Found Elpa: /opt/cp2k-7.1/tools/toolchain/install/elpa-2019.05.001/lib/libelpa.a
-- Checking for one of the modules 'libvdwxc>=0.3.0'
-- Looking for vdwxc_init_mpi
-- Looking for vdwxc_init_mpi - not found
CMake Error at /opt/cp2k-7.1/tools/toolchain/install/cmake-3.15.1/share/cmake-3.15/Modules/FindPackageHandleStandardArgs.cmake:137 (message):
Could NOT find LibVDWXC (missing: LIBVDWXC_LIBRARIES) (Required is at least
version "0.3.0")
Call Stack (most recent call first):
/opt/cp2k-7.1/tools/toolchain/install/cmake-3.15.1/share/cmake-3.15/Modules/FindPackageHandleStandardArgs.cmake:378 (_FPHSA_FAILURE_MESSAGE)
cmake/modules/FindLibVDWXC.cmake:35 (find_package_handle_standard_args)
CMakeLists.txt:198 (find_package)
-- Configuring incomplete, errors occurred!
See also "/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeOutput.log".
See also "/opt/cp2k-7.1/tools/toolchain/build/SIRIUS-6.4.1/build/CMakeFiles/CMakeError.log".
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