[CP2K-user] [CP2K:11824] free energy calculation in pimd

Webb Foo lta... at gmail.com
Sun Jun 2 01:20:59 UTC 2019


Hi Thomas,
Thanks for your reply. And I'll have a try.

Cheers,
Webb

在 2019年5月31日星期五 UTC+8上午4:52:40,tkuehne写道:
>
> Dear Webb Foo, 
>
> using constrained MD the free energy profile can be computed in terms of 
> the potential of mean force by means of the ensemble 
> average of the Lagrange multipliers to constrain your reaction coordinate. 
> You will find a particular good description in the SI of
> the following paper: https://www.pnas.org/content/104/8/2626.short
> However, when using PIMD, in my opinion the constraint has to be enforced 
> on the ring-polymer centroid, which most likely 
> requires a little bit of coding. 
>
> Best, 
> Thomas Kühne
>
> Am 30.05.2019 um 10:16 schrieb Webb Foo <l... at gmail.com <javascript:>>:
>
> Hello everyone,
>
> Can you explain me how to estimate the free energy profile from a pimd 
> simulation, like constrained MD?
>
> -- 
> You received this message because you are subscribed to the Google Groups 
> "cp2k" group.
> To unsubscribe from this group and stop receiving emails from it, send an 
> email to c... at googlegroups.com <javascript:>.
> To post to this group, send email to c... at googlegroups.com <javascript:>.
> Visit this group at https://groups.google.com/group/cp2k.
> To view this discussion on the web visit 
> https://groups.google.com/d/msgid/cp2k/00fd3074-6637-41ab-aa73-ef100c55db19%40googlegroups.com 
> <https://groups.google.com/d/msgid/cp2k/00fd3074-6637-41ab-aa73-ef100c55db19%40googlegroups.com?utm_medium=email&utm_source=footer>
> .
> For more options, visit https://groups.google.com/d/optout.
>
>
> ==============================
> Thomas D. Kühne
> Dynamics of Condensed Matter
> Chair of Theoretical Chemistry
> University of Paderborn
> Warburger Str. 100
> D-33098 Paderborn
> Germany
> td... at mail.upb.de <javascript:>
> +49/(0)5251/60-5726
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20190601/bc463c09/attachment.htm>


More information about the CP2K-user mailing list