[CP2K-user] [CP2K:10810] XC_HYB_MGGA_XC_WB97M_V functional in libxc
Frederick Stein
nwfr... at googlemail.com
Sun Apr 28 19:21:29 UTC 2019
Dear Stanislav,
Sorry for the delay. Thank you for your contribution. I included your
patch, now.
If you have contributions, it is easier to add them yourself. (see
https://www.cp2k.org/dev:starting)
Best regards.
Frederick
Am Dienstag, 9. Oktober 2018 10:10:15 UTC+2 schrieb Stanislav Šimko:
>
> If anybody would like to try, here are the patch files for xc_libxc.F
> and xc_libxc_wrap.F files that are in the cp2k/src/xc folder. You can apply
> them from the xc folder like:
> patch -p0 -i xc_libxc.F.patch
>
> On Monday, October 8, 2018 at 1:10:18 PM UTC+2, Stanislav Šimko wrote:
>>
>> Hello,
>>
>> I'm using cp2k 6.1 r.18604, git version. I compiled it myself (after
>> quite some struggle, probably because of problems with Intel
>> compilers), with MKL 18.0.3 and gcc 5.2.0 (both installed by
>> HPC admins).
>>
>> Also, to clarify on the (2) - SCF energy usually goes to huge values
>> after this warning (always for the benzene-Ar system). My box size is now
>> 31A for the benzene-Ar system (I tried up to 36A with no obvious success).
>> I'm troubled by the huge/wrong energy in SCF that does not want to get
>> reasonable not by the warning itself (see my partial logfile).
>>
>> Thank you!
>> Regards,
>> stanislav.
>>
>> On Monday, October 8, 2018 at 11:27:45 AM UTC+2, jgh wrote:
>>>
>>> Hi
>>>
>>> 1) Which version of CP2K are you using? This is an error
>>> for an internal optimization. Should not appear in newer versions of
>>> the code.
>>> 2) This is a warning. Not serious if your molecule is in the center
>>> of the box. If you enlarge the box the warning should disappear.
>>>
>>> regards
>>>
>>> Juerg Hutter
>>> --------------------------------------------------------------
>>> Juerg Hutter Phone : ++41 44 635 4491
>>> Institut für Chemie C FAX : ++41 44 635 6838
>>> Universität Zürich E-mail: h... at chem.uzh.ch
>>> Winterthurerstrasse 190
>>> CH-8057 Zürich, Switzerland
>>> ---------------------------------------------------------------
>>>
>>> -----c... at googlegroups.com wrote: -----
>>> To: "cp2k" <c... at googlegroups.com>
>>> From: "Stanislav Šimko"
>>> Sent by: c... at googlegroups.com
>>> Date: 10/08/2018 10:37AM
>>> Subject: Re: [CP2K:10810] XC_HYB_MGGA_XC_WB97M_V functional in libxc
>>>
>>> Hello,
>>>
>>> hopefully, someone will be able to help me further. As suggested, I'm
>>> trying to reproduce Benzene-Ar interaction potential, as well as some water
>>> dimers and some other things. When running with Ahlrichs-def2-QZVP basis,
>>> results seem OK-ish but not convincing enough in my opinion. Therefore, I'm
>>> now trying to get working (aug-)pc-3 basis set with the Benzene-Ar. My
>>> setup does not work though. System energy is exploding during SCF. I get 2
>>> warnings/errors:
>>> 1) POWELL| Error in trust region
>>> 2) *** WARNING in pw/ps_wavelet_methods.F:236 :: Density non-zero on
>>> the ***
>>> *** edges of the unit cell: wrong results in WAVELET solver
>>> ***
>>>
>>> I have no clue about the first one. Is it something related to math
>>> libraries (MKL)?
>>>
>>> The second one can be somewhat avoided when I increase cell size.
>>> However, this does not work all the time and I'm using 30A box already.
>>> Attached is my input.
>>> Do you please have got any suggestions?
>>> Thank you!
>>>
>>> On Tuesday, October 2, 2018 at 2:56:13 PM UTC+2, Stanislav Šimko wrote:
>>> Hi,
>>> Thank you for suggestions. I'm already working on some comparisons with
>>> what I hope could be the wB97M-V functional. Results are not perfect, but
>>> they are not bad as well. I will try to report more soon.
>>>
>>> On Tuesday, October 2, 2018 at 10:55:49 AM UTC+2, Frederick Stein wrote:
>>> Hi,
>>>
>>> I am familiar with the related wB97X-functionals by Head-Gordon,
>>> unfortunately not with those containing VV10 dispersion corrections like
>>> wB97(M)-V. Your XC_FUNCTIONAL section is correct.
>>> Use the following INTERACTION_POTENTIAL section
>>> &INTERACTION_POTENTIAL
>>> # Chose it a bit less than half the shortest nearest-neighbour
>>> distance (i.e. cubic box with a=4 A, cutoff = 1.99 A; or cp2k starts
>>> complaining)
>>> CUTOFF_RADIUS 4.0
>>> # c_sr V_sr + V_lr = c_sr V_Coul+(1-c_sr) V_lr
>>> SCALE_LONGRANGE 0.833
>>> SCALE_COULOMB 0.167 # Affects the scaling of the truncated
>>> potential for periodic systems
>>> # For non-periodic systems use MIX_CL instead
>>> POTENTIAL_TYPE MIX_CL_TRUNC
>>> T_C_G_DATA t_c_g.dat
>>> &END INTERACTION_POTENTIAL
>>> Finally, you miss the VDW-section to include the VV10 correction (See
>>> https://groups.google.com/forum/#!searchin/cp2k/wb97x%7Csort:date/cp2k/JEvnnfAEgPY/oryDShPd_w0J).
>>> They used something like this
>>> &vdW_POTENTIAL
>>> DISPERSION_FUNCTIONAL NON_LOCAL
>>> &NON_LOCAL
>>> TYPE RVV10
>>> PARAMETERS 6.3 0.0093
>>> VERBOSE_OUTPUT
>>> KERNEL_FILE_NAME
>>> /path/to/your/VV10/table/rVV10_kernel_table.dat
>>> CUTOFF 150
>>> &END NON_LOCAL
>>> &END vdW_POTENTIAL
>>> To my knowledge, cp2k provides only parameters for the rVV10 model, not
>>> for the VV10 model. You should test wether the rVV10 parameters are
>>> suitable. You might have a further look at the discussions to the wB97X-V
>>> functional in this forum. (
>>> https://groups.google.com/forum/#!searchin/cp2k/wb97x%7Csort:date/cp2k/JEvnnfAEgPY/oryDShPd_w0J,
>>>
>>> https://groups.google.com/forum/#!searchin/cp2k/wb97x|sort:date/cp2k/VsG6j38wdwI/rsJYd0ZpBwAJ,
>>>
>>> https://groups.google.com/forum/#!searchin/cp2k/wb97x|sort:date/cp2k/le-ojRVXWa0/acojYhQ0AwAJ)
>>>
>>> There are also some examples to test wB97X-V. According to the paper
>>> where wB97M-V was published, you might try some of the databases or the
>>> dissociation curve of this functional (benzene-argon-dimer) depending on
>>> what you can afford. When I tested some functionals, dissociation curves
>>> can be a good choice because the shape differs between different
>>> functionals as well as optimal distances and bonding energies.
>>> I think Juerg wrote in one of the mentioned threads that you should test
>>> the different parts (DFT, HF, VV10) of the functional seperately. Because
>>> there are different flavours of that functional (B97, wB97X, wB97X-V, these
>>> functionals with different dispersion corrections), there should not be a
>>> problem to find reference data.
>>>
>>> regards
>>>
>>> Frederick
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>>>
>>> [attachment "4.xyz" removed by Jürg Hutter/at/UZH]
>>> [attachment "4.in" removed by Jürg Hutter/at/UZH]
>>>
>>
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