free energy profile calculation
marci... at gmail.com
Sat Nov 12 11:11:16 UTC 2016
Indeed in the restart file all required information to build the free
energy hyper surface are stored, i.e, positions, widths and heights of the
hills. To sum up the Gaussians you can use the tool that you prefer.
As previously suggested the tool provided with plumed would be a solution.
Another possibility would be the sub-program graph that is compiled
together with cp2k.
On Tuesday, November 8, 2016 at 4:46:55 PM UTC+1, Jie Zhong wrote:
> Hi all,
> I am trying to get familiar with cp2k metadynamics method. I have finished
> the calculation.
> I was told to use the restart file to plot free energy profile as function
> of collective variable. How can I do it?
> The restart file has been attached.
> Any suggestion is appreciated.
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