[CP2K:7719] Transition State Optimization with Dimer Method
luca
lcb... at gmail.com
Fri May 6 16:18:37 UTC 2016
Dear Natalie
the dimer method is a tool to search
TS structures and it can be used to refine (or validate) TS provided by
other methods.
I have just looked your input, the dimer method section is ok; however,
the calculation of the frequency is very sensitive, so, I would suggest
you to increase the accuracy, decreasing RMS displacement and so on.
This is my usual set-up:
RMS_DR 1.0E-04 # 1.0E-04
MAX_DR 3.0E-04 # 3.0E-05
RMS_FORCE 1.0E-04 # 1.0E-04
MAX_FORCE 3.0E-04 # 3.0E-05
Actually, to obtain a single ifreq more tight parameters are required.
Pay attention, the dimer method shows a slow convergence, so it requires
many steps.
In the attached file you can find parameters that I used in
DOI:10.1021/jo3023439
Cheers,
Luca
On Thu, 2016-05-05 at 17:27 -0700, Natalie Austin wrote:
> Hello,
>
> I recently attempted to calculate a transition state for CO2
> dissociation using CI-NEB. Unfortunately, the NEB did not converge
> after 66 steps ( It ran once up to 32 steps then I had to resubmit it
> to run another 34 steps) and so I stopped the calculation because I
> noticed that the MAX FORCE for the NEB calculation was just
> fluctuating(see below). Would anyone be able to indicate why this is
> the case? I used the same input for a located a transition from
> physisorbed CO2 to chemisorbed CO2 on the same metal system and I did
> not have this problem.
>
> I did come across a case in the steps where all criteria was met
> except for the MAX force as shown below:
>
> RMS DISPLACEMENT = 0.00013 [ 0.00100]
> (YES)
> MAX DISPLACEMENT = 0.00225 [ 0.00300]
> (YES)
> RMS FORCE = 0.00025 [ 0.00100]
> (YES)
> MAX FORCE = 0.00407 [ 0.00300]
> ( NO)
>
> So I took that structure and ran vibrational analysis on it and found
> that it had 3 imaginary frequencies as shown below:
>
>
> As a previous user suggested I then tried to use the Transition State
> Dimer method to see if I could guide this structure to a transition
> state by providing the vectors in DIMER _VECTOR for the mode
> corresponding to the state that I was looking for. I was able to
> locate a potential transition state. I've providing the transition
> state coordinates below. Does it make sense to use CI-NEB and
> reoptimize with the Transition state search in cases where it is
> difficult to converge the NEB? Is this a common occurrence? I'm just
> trying to make sure that I'm locating transition states in an
> appropriate way.
>
> Thanks,
>
> Natalie
>
>
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-------------- next part --------------
&GEO_OPT
TYPE TRANSITION_STATE
OPTIMIZER CG
MAX_ITER 2000
RMS_DR 0.10E-04
MAX_DR 0.30E-04
RMS_FORCE 0.10E-04
MAX_FORCE 0.30E-04
&CG
MAX_STEEP_STEPS 0
&LINE_SEARCH
TYPE 2PNT
&2PNT
MAX_ALLOWED_STEP 0.20
&END
&END
&END CG
&TRANSITION_STATE
METHOD DIMER
&DIMER
DR [angstrom] 0.01
ANGLE_TOLERANCE [deg] 2.0
INTERPOLATE_GRADIENT T
&ROT_OPT
OPTIMIZER CG
MAX_ITER 12
&CG
MAX_STEEP_STEPS 0
&LINE_SEARCH
TYPE 2PNT
&2PNT
MAX_ALLOWED_STEP 0.10
&END
&END
&END
&END
&END
&END
&END GEO_OPT
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