MULLIKEN CHARGE
Josip Lovrić
josip7... at gmail.com
Mon Dec 19 18:05:55 UTC 2016
Sorry for not responding immediately, I was of computer for some time.
Published article on which I am referring is this
http://pubs.acs.org/doi/suppl/10.1021/jz3014985 and they give results for
BASIS PSEUDOPOTENTIAL. I have deleted my all electron calculations. I will
repeat them if necessary.
Now when I wanted to copy paste their results here I see that they actually
performed gas phase calculation with NO2 dimer + water and HCl molecule.
So my comparison make no sense, sorry for wasting your time. Nevertheless
this stays strange for me because I have also performed this calculation
(cis dimer isolate) in Gaussian(basis downloaded from
https://bse.pnl.gov/bse/portal) and charges are closed to one in paper.
No problem Matt, anyway I will try to implement your suggestions.
Josip
On Monday, December 19, 2016 at 5:29:54 PM UTC+1, Matt W wrote:
>
> Also, your box is too small, and maybe you don't centre your molecule
>
> &CELL
> ABC 10.0 10.0 10.0
> PERIODIC NONE
> &END CELL
> &COORD
> N 2.233559 -3.621843 1.337023
> O 2.067990 -2.527433 1.053663
> O 3.021496 -3.912949 2.863941
> N 3.415616 -2.732165 3.611083
> O 3.805883 -1.768317 2.949635
> O 3.319372 -2.851822 4.823878
> &END
> &TOPOLOGY
> &CENTER_COORDINATES
> &END
> &END TOPOLOGY
>
> Try something like above and see if it helps.
>
> Matt
>
> On Monday, December 19, 2016 at 4:09:18 PM UTC, Josip Lovrić wrote:
>>
>> Dear Matt,
>>
>> I totally agree with you and I am aware of fact that atomic charge are
>> just model.
>> Maybe I was not clear enough but my problem is that charges are not
>> consistent with published values.
>>
>> P.S. input files are named "*_all_electrons*". This is mistake,
>> calculation is not all electron, it is a relict from previous calculation.
>>
>> Josip
>>
>> On Monday, December 19, 2016 at 5:03:50 PM UTC+1, Matt W wrote:
>>>
>>> Hi Josip,
>>>
>>> Mulliken charges are not real observables - they are strongly dependent
>>> on the basis set, and they do not converge as you make the basis set
>>> complete. Check a quantum chemistry textbook for a good discussion
>>> ('Computational Chemistry', Errol Lewars for instance).
>>>
>>> Something more quantitative can come from something like Bader charge
>>> analysis (which needs external processing of a total_charge_density cube
>>> file).
>>>
>>> Matt
>>>
>>> On Monday, December 19, 2016 at 3:56:55 PM UTC, Josip Lovrić wrote:
>>>>
>>>> Dear CP2K community,
>>>>
>>>> Recently I was working on NO2-dimer and now I need help from you. Thing
>>>> is that I am running gas phase calculation of NO2 cis-dimer. After program
>>>> successfully finish GEOMETRIC OPTIMIZATION output configuration is
>>>> consistent with already published papers. Problem is in the MULLIKEN
>>>> charges. Charges are too small and not consistent with published values(I
>>>> am using same basis set).
>>>>
>>>> !-----------------------------------------------------------------------------!
>>>> Mulliken Population Analysis
>>>>
>>>> # Atom Element Kind Atomic population
>>>> Net charge
>>>> 1 N 1 4.968657
>>>> 0.031343
>>>> 2 O 2 5.852787
>>>> 0.147213
>>>> 3 O 2 6.191534
>>>> -0.191534
>>>> 4 N 1 4.928901
>>>> 0.071099
>>>> 5 O 2 6.056358
>>>> -0.056358
>>>> 6 O 2 6.001764
>>>> -0.001764
>>>> # Total charge 34.000000
>>>> 0.000000
>>>>
>>>>
>>>> !-----------------------------------------------------------------------------!
>>>> I am using BLYP functional with dispersion corrections and TZV2P basis
>>>> set with pseudo-potentials. Charges are becoming more physical when
>>>> performing all electron calculation, they increase for factor ~10.
>>>> For DZVP basis set charges increase little, but still to low:
>>>>
>>>> !-----------------------------------------------------------------------------!
>>>> Mulliken Population Analysis
>>>>
>>>> # Atom Element Kind Atomic population
>>>> Net charge
>>>> 1 N 1 4.951639
>>>> 0.048361
>>>> 2 O 2 5.822911
>>>> 0.177089
>>>> 3 O 2 6.202144
>>>> -0.202144
>>>> 4 N 1 4.858609
>>>> 0.141391
>>>> 5 O 2 6.103330
>>>> -0.103330
>>>> 6 O 2 6.061367
>>>> -0.061367
>>>> # Total charge 34.000000
>>>> -0.000000
>>>>
>>>>
>>>> !-----------------------------------------------------------------------------!
>>>> Am I doing something wrong? Do you have any explanation for this
>>>> results?
>>>> I would really appreciate.
>>>>
>>>> I am putting in attachment my input and output files.
>>>>
>>>> Best wishes
>>>> Josip
>>>>
>>>
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