How cp2k control the output
sungen... at gmail.com
sungen... at gmail.com
Wed Jan 28 05:58:29 UTC 2015
Wang :
Thank you for your reply, That's very helpful. I made a stupid
mistake that I counted the number of scf cycles as the number of
optimization processes.
I did not realize that the CG method in cp2k requiring several
energy_force computations.
And the tutorial you recommended is also very helpful. Thanks again!
Geng Sun
在 2015年1月27日星期二 UTC+8下午9:30:59,hua... at mail.huji.ac.il写道:
>
> Hi Sungen (If I typed your name correct... ),
>
> The position file from CP2K geometry optimization calculation is
> automatically printed step by step. I copied and run your code just now.
> The result file is attached.
> As you can see in the result position file, this calculation performed 12
> steps geometry optimization. For each step, the program printed the
> Cartesian coordinates with the letter "i" as the step number sign (i = 1 to
> 12 ).
>
> Unfortunately, almost every beginner of CP2K, including me, complained
> that the poor manual. I suggest that you first read some basic tutorials
> written by other CP2K users. One of the basic tutorials I recommend is from
> Dr. Sébastien LE ROUX. http://www.ipcms.unistra.fr/?page_id=14965&lang=en
> .
>
> And then try the test files in the cp2k/tests/QS/ directory. The most
> important things is to digest the listed literature in CP2K manual website.
> http://manual.cp2k.org/cp2k-2_6-branch/references.html
>
> Good luck,
> Huan Wang
>
>
>
>
>
> On Friday, January 23, 2015 at 5:04:00 AM UTC+2, sung... at gmail.com
> wrote:
>>
>> Hello everyone,
>>
>> I am a newbie about CP2K, and I have a stupid question ... .
>> I am confused about how CP2K controls the output during the
>> calculations. There are many print sections, and they are in different
>> levels. I'm quite
>> confused by the philosophy behind this. Is there any instruction
>> or tutorials on this?
>>
>> Specifically, I have two questions ,
>> Firstly I don't understand the meaning of the iteration levels,
>> and the print_key in the documents.
>> Secondly, I ran into problems when I am trying the example of
>> structure optimization of water in tutorials: The output of positions in
>> the file H2O-pos-1.xyz seems not at every time the force was calculated. I
>> want to output the positions of atoms every time the positions are changed,
>> how should I modifiy the input. There are many files localLog_p(#precess
>> number), which are created but none is there. I find a similar question
>> in this mailist long ago. And this is likely a bug then, but my cp2k is
>> the newest version (2.6). So is this right ?
>>
>>
>> Thank you for any suggestions !
>>
>> The input for water optimization, exactly same as in the tutorials:
>>
>> &GLOBAL
>> PROJECT H2O
>> RUN_TYPE GEO_OPT
>> PRINT_LEVEL LOW
>> &END GLOBAL
>> &FORCE_EVAL
>> METHOD QS
>> &SUBSYS
>> &CELL
>> ABC 12.4138 12.4138 12.4138
>> &END CELL
>> &COORD
>> O 12.235322 1.376642 10.869880
>> H 12.415139 2.233125 11.257611
>> H 11.922476 1.573799 9.986994
>> &END COORD
>> &KIND H
>> BASIS_SET DZVP-GTH-PADE
>> POTENTIAL GTH-PADE-q1
>> &END KIND
>> &KIND O
>> BASIS_SET DZVP-GTH-PADE
>> POTENTIAL GTH-PADE-q6
>> &END KIND
>> &END SUBSYS
>> &DFT
>> BASIS_SET_FILE_NAME ./BASIS_SET
>> POTENTIAL_FILE_NAME ./POTENTIAL
>> &QS
>> EPS_DEFAULT 1.0E-7
>> &END QS
>> &MGRID
>> CUTOFF 200
>> NGRIDS 4
>> REL_CUTOFF 30
>> &END MGRID
>> &SCF
>> SCF_GUESS ATOMIC
>> EPS_SCF 1.0E-05
>> MAX_SCF 200
>> &DIAGONALIZATION T
>> ALGORITHM STANDARD
>> &END DIAGONALIZATION
>> &MIXING T
>> ALPHA 0.5
>> METHOD PULAY_MIXING
>> NPULAY 5
>> &END MIXING
>> &PRINT
>> &RESTART OFF
>> &END RESTART
>> &END PRINT
>> &END SCF
>> &XC
>> &XC_FUNCTIONAL PADE
>> &END XC_FUNCTIONAL
>> &END XC
>> &END DFT
>> &END FORCE_EVAL
>> &MOTION
>> &GEO_OPT
>> TYPE MINIMIZATION
>> MAX_DR 1.0E-03
>> MAX_FORCE 1.0E-03
>> RMS_DR 1.0E-03
>> RMS_FORCE 1.0E-03
>> MAX_ITER 200
>> OPTIMIZER CG
>> &CG
>> MAX_STEEP_STEPS 0
>> RESTART_LIMIT 9.0E-01
>> &END CG
>> &END GEO_OPT
>> &CONSTRAINT
>> &FIXED_ATOMS
>> COMPONENTS_TO_FIX XYZ
>> LIST 1
>> &END FIXED_ATOMS
>> &END CONSTRAINT
>> &END MOTION
>>
>>
>>
>>
>
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