[CP2K:5813] Compiling with hwloc

Ole Schütt o... at schuett.name
Thu Nov 6 15:23:21 CET 2014



Hi Vedran,

the compilation problems are cause by missing USE-statements. I just committed a fix to svn.
Btw, the HWTOPO flag got removed from the Makefile. Things should work without it.

-Ole


On Thursday, November 6, 2014 11:48:25 AM UTC+1, Vedran Miletić wrote:
>
> Hello Christiane,
>
> thank you for your response. I tried this approach, but unfortunately I 
> get the same error. Do you have any other idea I can try?
>
> Regards,
> Vedran
>
> Dana srijeda, 5. studenoga 2014. 08:03:03 UTC+1, korisnik Christiane Pousa 
> Ribeiro napisao je:
>>
>> Dear Vedran,
>>
>> Could you please add the line bellow to your arch file and give a try?
>>
>> HWTOPO   = yes
>>
>> You should include too the -I/usr/include/hwloc.
>>
>> Best regards, 
>>
>>
>>
>> On Tue, Nov 4, 2014 at 10:34 PM, Vedran Miletić <riv... at gmail.com> wrote:
>>
>>> Hello,
>>>
>>> I'm trying to compile CP2K with hwloc support enabled. I'm using Debian 
>>> testing with gfortran 4.9. My arch file is:
>>>
>>> CC       = mpicc
>>> CPP      =
>>> FC       = mpif90
>>> LD       = gfortran
>>> AR       = ar -r
>>>
>>> DFLAGS   = -D__GFORTRAN -D__parallel -D__HWLOC -D__FFTSG -D__FFTW3 
>>> -D__LIBINT -D__LIBXC2 -D__BLACS -D__SCALAPACK -D__ELPA
>>> CPPFLAGS = -C -traditional $(DFLAGS)
>>> FCFLAGS  = -g -Wall -O3 -ffast-math -funroll-loops -ftree-vectorize 
>>> -ffree-form -ffree-line-length-none $(DFLAGS) -I/usr/include/elpa/modules
>>> LDFLAGS  = $(FCFLAGS) 
>>> LIBS     = -llapack -lblas -lfftw3 -lint -lderiv -lxc -lhwloc -lmpi 
>>> -lmpif90 -lmpif77 -lblacsCinit-openmpi -lblacs-openmpi -lscalapack-openmpi 
>>> -lelpa
>>>
>>> Upon compiling, I get:
>>>
>>>      cardId = ma_get_netDev(my_info%core, my_info%mp_info%myproc)
>>>               1
>>> Error: Function 'ma_get_netdev' at (1) has no IMPLICIT type
>>> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:1041.8:
>>>
>>>    IF ( ma_get_nnetDev(node) .GT. 0 ) THEN
>>>         1
>>> Error: Function 'ma_get_nnetdev' at (1) has no IMPLICIT type
>>> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:1044.12:
>>>
>>>      node = ma_get_node_netDev()
>>>             1
>>> Error: Function 'ma_get_node_netdev' at (1) has no IMPLICIT type
>>> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:937.39:
>>>
>>>   my_info%threads_info(id+1)%id_real = ma_get_thread_id()
>>>                                        1
>>> Error: Function 'ma_get_thread_id' at (1) has no IMPLICIT type
>>> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:744.14:
>>>
>>>     my_node = ma_get_core_node(my_core)
>>>               1
>>> Error: Function 'ma_get_core_node' at (1) has no IMPLICIT type
>>> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:693.41:
>>>
>>>     my_info%threads_info(id+1)%id_real = ma_get_thread_id()
>>>                                          1
>>> Error: Function 'ma_get_thread_id' at (1) has no IMPLICIT type
>>> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:628.41:
>>>
>>>     my_info%threads_info(id+1)%id_real = ma_get_thread_id()
>>>                                          1
>>> Error: Function 'ma_get_thread_id' at (1) has no IMPLICIT type
>>> mpif90 -c -g -Wall -O3 -ffast-math -funroll-loops -ftree-vectorize 
>>> -ffree-form -ffree-line-length-none -D__GFORTRAN -D__parallel -D__HWLOC 
>>> -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2 -D__BLACS -D__SCALAPACK -D__ELPA 
>>> -I/usr/lib/openmpi/include/openmpi/opal/mca/hwloc/ 
>>> -I/usr/include/elpa/modules 
>>> -D__COMPILE_ARCH="\"Linux-x86-64-debian-gfortran\"" -D__COMPILE_DATE="\"Uto 
>>> Stu  4 22:28:09 CET 2014\"" -D__COMPILE_HOST="\"akston\"" 
>>> -D__COMPILE_REVISION="\"git:eb7b195\"" -D__SHORT_FILE__="\"cp_files.F\"" 
>>> /home/vedranm/workspace/cp2k.git/cp2k/src/common/cp_files.F 
>>> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:528.38:
>>>
>>>     my_info%threads_info(id+1)%node = ma_get_core_node(core)
>>>                                       1
>>> Error: Function 'ma_get_core_node' at (1) has no IMPLICIT type
>>> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:530.41:
>>>
>>>     my_info%threads_info(id+1)%id_real = ma_get_thread_id()
>>>                                          1
>>> Error: Function 'ma_get_thread_id' at (1) has no IMPLICIT type
>>> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:454.41:
>>>
>>>     my_info%threads_info(id+1)%id_real = ma_get_thread_id()
>>>                                          1
>>> Error: Function 'ma_get_thread_id' at (1) has no IMPLICIT type
>>> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:376.41:
>>>
>>>     my_info%threads_info(id+1)%id_real = ma_get_thread_id()
>>>                                          1
>>> Error: Function 'ma_get_thread_id' at (1) has no IMPLICIT type
>>> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:316.39:
>>>
>>>   my_info%threads_info(id+1)%id_real = ma_get_thread_id()
>>>                                        1
>>> Error: Function 'ma_get_thread_id' at (1) has no IMPLICIT type
>>> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:321.33:
>>>
>>>   my_info%threads_info(1)%node = ma_get_core_node(core)
>>>                                  1
>>> Error: Function 'ma_get_core_node' at (1) has no IMPLICIT type
>>>
>>> I tried adding -I/usr/include/hwloc and 
>>> -I/usr/lib/openmpi/include/openmpi/opal/mca/hwloc but it made no change. 
>>> Any ideas?
>>>
>>> Regards,
>>> Vedran Miletić
>>>
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>>
>>
>>
>> -- 
>> []'s
>> Christiane Pousa Ribeiro
>>  
>> "Judge a man by his questions, rather than by his answers" 
>>  
>
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