some errors when run cp2k for a quickstep
jian... at gmail.com
jian... at gmail.com
Sat Jan 11 06:54:38 UTC 2014
Hi all,
OS :CENTOS 6 64
compiler: intel ifort 11.1.072
MKL 10.2.6.038
FFTW fftw-3.3.3
libint : libint-1.1.4
openmpi-1.6.5
when run in terminal $ mpirun -np 4 ../../cp2k.popt -i
he-cp2k-10gcm-3-10000K-64.inp -o he-cp2k-10gcm-3-10000K-64.out &
Then, there are some errors informations in terminal.
ASSERTION FAILED: F
dbcsr_error_print_stack
error%msg=
Matrix not initialized
error%routine=
dbcsr_release
error%etype= 1
error%level= 1
error%line= 422
error%stack%level= 0
dbcsr_error_stack_size= 30
ASSERTION FAILED: F
dbcsr_error_print_stack
error%msg=
Matrix not initialized
error%routine=
dbcsr_release
error%etype= 1
error%level= 1
error%line= 422
error%stack%level= 0
dbcsr_error_stack_size= 30
ASSERTION FAILED: F
dbcsr_error_print_stack
error%msg=
Matrix not initialized
error%routine=
dbcsr_release
error%etype= 1
error%level= 1
error%line= 422
error%stack%level= 0
dbcsr_error_stack_size= 30
ASSERTION FAILED: F
dbcsr_error_print_stack
error%msg=
Matrix not initialized
error%routine=
dbcsr_release
error%etype= 1
error%level= 1
error%line= 422
error%stack%level= 0
dbcsr_error_stack_size= 30
And, in the file 64He-MD_localLog_p1.out
##################################################
*** Local logger file of MPI task 1 in communicator 0 ***
*** PID = 15658
*** Hostname = node03
===== Routine Calling Stack =====
7 cp_dbcsr_deallocate_matrix
6 deallocate_dbcsr_matrix_set
5 qs_energies_scf
4 qs_forces
3 velocity_verlet
2 qs_mol_dyn_low
1 CP2K
*** 11:26:19 WARNING in cp_dbcsr_deallocate_matrix :: You should not ***
*** "deallocate" a referenced matrix. Avoid pointers to DBCSR matrices. ***
##################################################
This is the file Linux-x86-64-intel.popt
##################################################
CC = /opt/intel/Compiler/11.1/072/bin/intel64/icc
CPP =
FC = mpif90
LD = mpif90
AR = ar -r
INTEL_MKL=/opt/intel/mkl/10.2.6.038
INTEL_INC = -I$(INTEL_MKL)/include -I$(INTEL_MKL)/include/em64t/lp64
-I/home/local/fzj/cp2k/fftw333/include
INTEL_LIB = $(INTEL_MKL)/lib/em64t
DFLAGS = -D__HAS_NO_ISO_C_BINDING -D__INTEL -D__FFTSG -D__parallel
-D__BLACS -D__SCALAPACK -D__FFTW3 -D__LIBINT -D__ELPA
CPPFLAGS = -C -traditional $(DFLAGS) -I$(INTEL_INC)
FCFLAGS = $(DFLAGS) -I$(INTEL_INC) -O2 -msse2 -heap-arrays 64
-funroll-loops -fpp -free
FCFLAGS2 = $(DFLAGS) -I$(INTEL_INC) -O1 -msse2 -heap-arrays 64 -fpp -free
LDFLAGS = $(FCFLAGS) -I$(INTEL_INC)
LIBS = -Wl,--start-group -L${INTEL_LIB} -lmkl_blacs_openmpi_lp64
-lmkl_lapack95_lp64 \
-lmkl_scalapack_lp64 -lmkl_sequential -lmkl_intel_lp64 -lmkl_core
-lmkl_intel_thread \
/home/local/fzj/cp2k/fftw333/lib/libfftw3_mpi.a -Wl,--end-group \
/home/local/fzj/cp2k/cp2k-2.4.0/tools/hfx_tools/libint_tools/libint_cpp_wrapper.o
\
/home/local/fzj/cp2k/libint114/lib/libderiv.a \
/home/local/fzj/cp2k/libint114/lib/libint.a \
-lstdc++ -lm -lpthread -liomp5
OBJECTS_ARCHITECTURE = machine_intel.o
graphcon.o: graphcon.F
$(FC) -c $(FCFLAGS2) $<
##################################################
any suggestions?
thanks for help!!!
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