[CP2K:4420] PLUMED patch for cp2k
Ralph Koitz
ralph... at gmail.com
Mon May 13 07:30:14 UTC 2013
Dear Hanning Chen,
Thanks for your interest in plumed and its interface to cp2k. I will be in
touch with the plumed developers to integrate the cp2k-related
functionality.
In the meantime I have uploaded a modified version of plumed under the
following link:
https://docs.google.com/file/d/0B2fydPxv8acJRl9BdVRONHVYNEU/edit?usp=sharing
Some brief installation instructions:
-- get the latest version of cp2k from the svn repository (the code and
makefile are prepared for plumed)
-- unpack the plumed-1.3 archive somewhere (the metadyn.c/.h are already
updated in that archive)
-- set the environment variable $plumedir to the root directory of the
plumed distribution
export plumedir=/users/xyz/plumed-1.3
-- symlink the plumed/patches/plumedpatch_cp2k.sh into the cp2k src
directory
ln -s $plumedir/patches/plumedpatch_cp2k.sh cp2k/src/
-- run the plumedpatch_cp2k script with parameter -patch, it should
create a subdirectory src-plumed containing a number
of cpp files and a plumed.inc
./plumedpatch.sh -patch
-- compile plumed with
make plumed -j ARCH=... VERSION=popt PLUMED=yes
-- test and run
And to use plumed, insert the following in the FREE_ENERGY section of a
cp2k input file:
&METADYN
USE_PLUMED .TRUE.
PLUMED_INPUT_FILE ./filename.inp
&END METADYN
So far we have only tested it with gfortran on a linux machine.
Let me know if you have any issues.
Regards,
Ralph
On Fri, May 10, 2013 at 5:31 PM, Hanning Chen <chenh... at gmail.com> wrote:
> Dear CP2K developers,
>
> I am interested in trying the new replica-exchange molecular dynamics
> feature driven by PLUMED.
> Could someone kindly share the PLUMED patch for cp2k with me? It seems to
> me that the official PLUMED repository does not provide the needed cp2k
> patch file.
>
> Thanks.
>
> Hanning
>
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