Bug? Weird behaviour for FIXED_ATOMS in GEO_OPT (recent CP2K versions)
marci
marc... at pci.uzh.ch
Wed Oct 24 09:22:55 UTC 2012
Dear Raphael
You should be able to recover the right behavior changing the BFGS section
as follows
&BFGS
USE_MODEL_HESSIAN FALSE
USE_RAT_FUN_OPT TRUE
TRUST_RADIUS 0.1
@if ${HESSIAN} == 1
RESTART_HESSIAN
RESTART_FILE_NAME ${PROJECT}-BFGS.Hessian
@endif
&END
This restores the old defaults.
I hope the problem will be fixed soon.
kind regards
marcella
On Tuesday, October 23, 2012 11:25:24 PM UTC+2, Dr_Nick wrote:
>
> Hi all,
>
> I am running a GEO_OPT with constraints. My file (attached) contains the
> following section:
>
> &CONSTRAINT
> &FIXED_ATOMS
> COMPONENTS_TO_FIX XYZ
> LIST 1 2 11..14 35..38
> &END FIXED_ATOMS
> &END CONSTRAINT
>
> I recall that this worked with CP2K 2.2 and 2.3 version: i.e. the xyz
> coordinates of the fixed atoms do not move during optimization.
>
> However with 2.4 (today's 12467) I noticed some very strange things:
> - the 1st geometry (i=1) in the -pos-1.xyz file does NOT correspond to the
> starting structure. All positions are slightly off. This is also true when
> no constraints are applied and / or when I use other input files!
> - Fixed atoms move slightly.
> - In one of my systems, some of the fixed atoms move slightly, while other
> fixed atoms experience large and totally "senseless" deplacements which
> causes the geometry optimization to fail.
>
> N.B.
> - the constraints section is correctly read in because no force is
> displayed for the fixed atoms.
> - the starting structure is reasonable because it was preoptimized before
> with another software.
>
> I ran the same input on different machines (Magny Cours and Xeon) to check
> for parallelization / optimization / compiler / version issues.
> 2.4 branch 12467, 12431
> 2.3 branch 12343, 12275, 12230, 12229
> AMD: gcc 4.6.3 / 4.6.2 / 4.7.0 + openmpi 1.6.1 + openblas 0.1.1 / 0.2.3 +
> fftw 3.3
> INTEL: intel 12.1.2 + openmpi 1.6.1 + MKL + intel FFTW / -O2 and -O3
> optimization
> These versions have been compiled either by me or the admins of our
> cluster. I guess they know what they are doing.
>
> Here are my findings:
>
> - running on 1 CPU (cp2k.sopt) or using only 1 MPI process (cp2k.popt),
> everything is OK (*all versions*)
> - running on more than 1 CPU everything is OK for <= 2.3 12230. All higher
> revisions are affected.
> - OpenMPI has probably no influence because with the same version (1.6.1),
> old CP2K revisions are ok, new revisions are not. This would require more
> testing but where can I download old 2.3 revisions? The svn always gives
> you the most recent version.
> - O2 / O3 optimization tested in the case of the intel compiler: no
> difference.
>
> So in my understanding, all versions >= 2.3 12230 are affected, when
> running on more than 1 CPU.
>
> Could you please have a look into this issue or try to reproduce? My input
> files are attached.
>
> Best regards and thanks for your help,
> Raphael
>
>
>
>
>
>
>
>
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