Problem with installation

Isaak Daniels isaakdan... at gmail.com
Mon Aug 29 17:49:00 UTC 2011


Here is the output. Thank you

make LDFLAGS= -C /home/isaak2/cp2k/makefiles/../obj/Linux-x86-64-pgi/
tools -f /home/isaak2/cp2k/makefiles/../makefiles/Makefile makedepf90
make[1]: Entering directory `/home/isaak2/cp2k/obj/Linux-x86-64-pgi/
tools'
make[1]: `makedepf90' is up to date.
make[1]: Leaving directory `/home/isaak2/cp2k/obj/Linux-x86-64-pgi/
tools'
make -C /home/isaak2/cp2k/makefiles/../src -f /home/isaak2/cp2k/
makefiles/../makefiles/Makefile all.dep
make[1]: Entering directory `/home/isaak2/cp2k/src'
/home/isaak2/cp2k/makefiles/../obj/Linux-x86-64-gfortran/tools/
makedepf90 -m "%m.mod"  -free admm_methods.F admm_types.F ai_angmom.F
ai_coulomb.F ai_coulomb_test.F ai_derivatives.F ai_elec_field.F
ai_eri_debug.F ai_fermi_contact.F ai_geminals.F ai_geminals_debug.F
ai_geminals_utils.F ai_kinetic.F ai_moments.F ai_onecenter.F
ai_oneelectron.F ai_os_rr.F ai_overlap_new.F ai_overlap_ppl.F
ai_spin_orbit.F ai_verfc.F atom.F atom_basis.F
atom_electronic_structure.F atom_energy.F atom_fit.F
atom_kind_orbitals.F atom_operators.F atom_optimization.F
atom_output.F atom_pseudo.F atom_types.F atom_utils.F atom_xc.F
atomic_charges.F atomic_kind_list_types.F atomic_kind_types.F
atoms_input.F atprop_types.F averages_types.F barostat_types.F
barostat_utils.F basis_set_types.F bessel_lib.F beta_gamma_psi.F
bfgs_optimizer.F bibliography.F block_p_types.F bsse.F c_mpi_calls.F
cell_opt.F cell_opt_types.F cell_opt_utils.F cell_types.F
cg_optimizer.F cg_test.F cg_utils.F cluster_buffers.F
cluster_methods.F cluster_types.F colvar_methods.F colvar_types.F
colvar_utils.F constraint.F constraint_3x3.F constraint_4x6.F
constraint_clv.F constraint_fxd.F constraint_util.F constraint_vsite.F
core_ae.F core_ppl.F core_ppnl.F cp2k_debug.F cp2k_info.F cp2k_runs.F
cp_array_i_utils.F cp_array_logical_utils.F cp_array_r_utils.F
cp_array_utils.F cp_blacs_calls.F cp_blacs_env.F cp_cfm_basic_linalg.F
cp_cfm_diag.F cp_cfm_types.F cp_control_types.F cp_control_utils.F
cp_dbcsr_cholesky.F cp_dbcsr_diag.F cp_dbcsr_interface.F
cp_dbcsr_methods.F cp_dbcsr_operations.F cp_dbcsr_output.F
cp_dbcsr_types.F cp_dbcsr_xlat.F cp_ddapc.F cp_ddapc_forces.F
cp_ddapc_methods.F cp_ddapc_types.F cp_ddapc_util.F
cp_error_handling.F cp_external_control.F cp_files.F
cp_fm_basic_linalg.F cp_fm_cholesky.F cp_fm_diag.F cp_fm_pool_types.F
cp_fm_struct.F cp_fm_types.F cp_fm_vect.F cp_iter_types.F cp_lbfgs.F
cp_lbfgs_geo.F cp_lbfgs_optimizer_gopt.F cp_linked_list_3d_r.F
cp_linked_list_char.F cp_linked_list_fm.F cp_linked_list_int.F
cp_linked_list_logical.F cp_linked_list_pw.F cp_linked_list_real.F
cp_linked_list_rs.F cp_linked_list_val.F cp_linked_list_xc_deriv.F
cp_log_handling.F cp_output_handling.F cp_para_env.F cp_para_types.F
cp_parser_buffer_types.F cp_parser_ilist_methods.F
cp_parser_ilist_types.F cp_parser_inpp_methods.F
cp_parser_inpp_types.F cp_parser_methods.F cp_parser_status_types.F
cp_parser_types.F cp_result_methods.F cp_result_types.F
cp_subsys_methods.F cp_subsys_types.F cp_symmetry.F cp_units.F
cpot_types.F csvr_system_dynamics.F csvr_system_init.F
csvr_system_mapping.F csvr_system_types.F csvr_system_utils.F
cube_utils.F cuda_cublas.F cuda_memory.F d3_poly.F
damping_dipole_types.F dbcsr_tests.F dft_plus_u.F dg_rho0_types.F
dg_types.F dgs.F dimer_methods.F dimer_types.F dimer_utils.F
distribution_1d_types.F distribution_2d_types.F distribution_methods.F
distribution_optimize.F dkh_main.F dm_ls_scf.F dm_ls_scf_methods.F
dm_ls_scf_qs.F dm_ls_scf_types.F efield_utils.F eigenvalueproblems.F
eip_environment.F eip_environment_types.F eip_main.F eip_silicon.F
environment.F ep_methods.F ep_qs_methods.F ep_qs_types.F ep_types.F
erf_fn.F et_coupling.F et_coupling_types.F ewald_environment_types.F
ewald_pw_methods.F ewald_pw_types.F ewald_spline_util.F ewalds.F
ewalds_multipole.F ewalds_multipole_debug.F exclusion_types.F
extended_system_dynamics.F extended_system_init.F
extended_system_mapping.F extended_system_types.F
external_potential_methods.F external_potential_types.F f77_blas.F
f77_blas_extra.F f77_blas_generic.F f77_blas_netlib.F
f77_blas_poison.F f77_int_low.F f77_interface.F farming_methods.F
farming_types.F fermi_utils.F fft_tools.F fist_energy_types.F
fist_environment.F fist_environment_types.F fist_force.F
fist_intra_force.F fist_main.F fist_neighbor_list_control.F
fist_neighbor_list_types.F fist_neighbor_lists.F
fist_nonbond_env_types.F fist_nonbond_force.F fist_pol_scf.F
force_env_methods.F force_env_types.F force_env_utils.F
force_field_types.F force_fields.F force_fields_all.F
force_fields_ext.F force_fields_input.F force_fields_util.F
fp_methods.F fp_types.F fparser.F free_energy_methods.F
free_energy_types.F gamma.F gauss_colloc.F gaussian_gridlevels.F
geo_opt.F gle_system_dynamics.F gle_system_types.F glob_matching.F
global_types.F gopt_f77_methods.F gopt_f_methods.F gopt_f_types.F
gopt_param_types.F graphcon.F harris_energy_types.F harris_env_types.F
harris_force.F harris_force_types.F harris_functional.F
hartree_local_methods.F hartree_local_types.F header.F helium_common.F
helium_interactions.F helium_io.F helium_methods.F helium_sampling.F
helium_types.F hfx_admm_utils.F hfx_communication.F
hfx_compression_core_methods.F hfx_compression_methods.F
hfx_contract_block.F hfx_contraction_methods.F hfx_derivatives.F
hfx_energy_potential.F hfx_helpers.F hfx_libint_interface.F
hfx_libint_wrapper.F hfx_libint_wrapper_types.F
hfx_load_balance_methods.F hfx_pair_list_methods.F hfx_ri_gemopt.F
hfx_ri_methods.F hfx_screening_methods.F hfx_types.F input_constants.F
input_cp2k.F input_cp2k_atom.F input_cp2k_atprop.F
input_cp2k_barostats.F input_cp2k_binary_restarts.F input_cp2k_check.F
input_cp2k_colvar.F input_cp2k_constraints.F input_cp2k_dft.F
input_cp2k_distribution.F input_cp2k_eip.F input_cp2k_force_eval.F
input_cp2k_free_energy.F input_cp2k_hfx.F input_cp2k_mixed.F
input_cp2k_mm.F input_cp2k_motion.F input_cp2k_poisson.F
input_cp2k_qmmm.F input_cp2k_resp.F input_cp2k_restarts.F
input_cp2k_rsgrid.F input_cp2k_subsys.F input_cp2k_thermostats.F
input_cp2k_vib.F input_cp2k_xc.F input_enumeration_types.F
input_keyword_types.F input_optimize_input.F input_parsing.F
input_section_types.F input_val_types.F integrator.F
integrator_utils.F iterate_matrix.F k290.F kahan_sum.F kinds.F
lapack.F lazy.F lebedev.F lgrid_types.F library_tests.F
linear_systems.F machine.F manybody_eam.F manybody_potential.F
manybody_tersoff.F mathconstants.F mathlib.F mc_control.F
mc_coordinates.F mc_ensembles.F mc_environment_types.F mc_ge_moves.F
mc_misc.F mc_move_control.F mc_moves.F mc_run.F mc_types.F
md_conserved_quantities.F md_ener_types.F md_energies.F
md_environment_types.F md_run.F md_util.F md_vel_utils.F
memory_utilities.F message_passing.F metadynamics.F
metadynamics_types.F metadynamics_utils.F mixed_energy_types.F
mixed_environment.F mixed_environment_types.F
mixed_environment_utils.F mixed_main.F mm_collocate_potential.F
mm_mapping_library.F mode_selective.F mol_force.F
mol_kind_new_list_types.F mol_new_list_types.F molden_utils.F
molecular_states.F molecule_kind_types.F molecule_types_new.F molsym.F
moments_utils.F motion_utils.F mt_util.F mulliken.F multipole_types.F
neb_io.F neb_md_utils.F neb_methods.F neb_opt_utils.F neb_types.F
neb_utils.F optimize_input.F orbital_pointers.F orbital_symbols.F
orbital_transformation_matrices.F pair_potential.F
pair_potential_coulomb.F pair_potential_types.F pair_potential_util.F
parallel_rng_types.F particle_list_types.F particle_types.F
paw_proj_set_types.F periodic_table.F physcon.F pint_gle.F pint_io.F
pint_methods.F pint_normalmode.F pint_public.F pint_staging.F
pint_transformations.F pint_types.F pme.F pme_tools.F
population_analyses.F powell.F preconditioner.F preconditioner_types.F
ps_wavelet_base.F ps_wavelet_fft3d.F ps_wavelet_kernel.F
ps_wavelet_scaling_function.F ps_wavelet_types.F ps_wavelet_util.F
pw_env_methods.F pw_env_types.F pw_grid_info.F pw_grid_types.F
pw_grids.F pw_methods.F pw_methods_cuda.F pw_poisson_methods.F
pw_poisson_types.F pw_pool_types.F pw_spline_utils.F pw_types.F
qmmm_elpot.F qmmm_ff_fist.F qmmm_gaussian_data.F qmmm_gaussian_init.F
qmmm_gaussian_input.F qmmm_gaussian_types.F qmmm_gpw_energy.F
qmmm_gpw_forces.F qmmm_init.F qmmm_links_methods.F qmmm_main.F
qmmm_per_elpot.F qmmm_pw_grid.F qmmm_se_energy.F qmmm_se_forces.F
qmmm_topology_util.F qmmm_types.F qmmm_util.F
qs_block_davidson_types.F qs_charges_types.F qs_collocate_density.F
qs_conductivity.F qs_core_energies.F qs_core_hamiltonian.F
qs_density_mixing_types.F qs_dftb_coulomb.F qs_dftb_dispersion.F
qs_dftb_matrices.F qs_dftb_parameters.F qs_dftb_types.F
qs_dftb_utils.F qs_diis.F qs_diis_types.F qs_dispersion_pairpot.F
qs_dispersion_types.F qs_efield_berry.F qs_elec_field.F
qs_electric_field_gradient.F qs_energy.F qs_energy_types.F
qs_environment.F qs_environment_methods.F qs_environment_types.F
qs_epr_hyp.F qs_external_potential.F qs_fermi_contact.F qs_force.F
qs_force_types.F qs_gapw_densities.F qs_geminals.F qs_grid_atom.F
qs_gspace_mixing.F qs_harmonics_atom.F qs_initial_guess.F
qs_integrate_potential.F qs_interactions.F qs_kinetic.F
qs_kpp1_env_methods.F qs_kpp1_env_types.F qs_ks_apply_restraints.F
qs_ks_atom.F qs_ks_methods.F qs_ks_qmmm_methods.F qs_ks_qmmm_types.F
qs_ks_scp_methods.F qs_ks_scp_types.F qs_ks_types.F
qs_linres_atom_current.F qs_linres_current.F qs_linres_current_utils.F
qs_linres_epr_nablavks.F qs_linres_epr_ownutils.F
qs_linres_epr_utils.F qs_linres_issc_utils.F qs_linres_methods.F
qs_linres_module.F qs_linres_nmr_epr_common_utils.F
qs_linres_nmr_shift.F qs_linres_nmr_utils.F qs_linres_op.F
qs_linres_types.F qs_loc_control.F qs_loc_methods.F qs_loc_molecules.F
qs_loc_types.F qs_loc_utils.F qs_local_rho_types.F
qs_localization_methods.F qs_main.F qs_matrix_pools.F qs_mo_methods.F
qs_mo_types.F qs_modify_pab_block.F qs_moments.F
qs_neighbor_list_types.F qs_neighbor_lists.F qs_oce_methods.F
qs_oce_types.F qs_operators_ao.F qs_ot.F qs_ot_eigensolver.F
qs_ot_minimizer.F qs_ot_scf.F qs_ot_types.F qs_outer_scf.F
qs_overlap.F qs_p_env_methods.F qs_p_env_types.F qs_p_sparse_psi.F
qs_pdos.F qs_period_efield_types.F qs_resp.F qs_rho0_ggrid.F
qs_rho0_methods.F qs_rho0_types.F qs_rho_atom_methods.F
qs_rho_atom_types.F qs_rho_methods.F qs_rho_types.F qs_scf.F
qs_scf_block_davidson.F qs_scf_diagonalization.F qs_scf_lanczos.F
qs_scf_methods.F qs_scf_post_gpw.F qs_scf_post_se.F qs_scf_types.F
qs_spin_orbit.F qs_tddfpt_eigensolver.F qs_tddfpt_module.F
qs_tddfpt_types.F qs_tddfpt_utils.F qs_util.F qs_vxc.F qs_vxc_atom.F
qs_wf_history_methods.F qs_wf_history_types.F realspace_grid_cube.F
realspace_grid_types.F reference_manager.F reftraj_types.F
reftraj_util.F rel_control_types.F replica_methods.F replica_types.F
restraint.F ri_environment_types.F rmsd.F rt_make_propagators.F
rt_matrix_exp.F rt_propagation.F rt_propagation_methods.F
rt_propagation_output.F rt_propagation_types.F rt_propagation_utils.F
rt_propagator_init.F s_square_methods.F sap_kind_types.F
scf_control_types.F scp_coeff_types.F scp_density_methods.F
scp_diis_utils.F scp_dispersion.F scp_energy.F scp_energy_types.F
scp_environment.F scp_environment_methods.F scp_environment_types.F
scp_force_types.F scp_hartree_1center.F scp_nddo_utils.F
scp_restarts.F scp_rho_methods.F scp_rho_types.F scp_rspw_methods.F
scp_rspw_types.F se_core_core.F se_core_matrix.F se_fock_matrix.F
se_fock_matrix_coulomb.F se_fock_matrix_dbg.F
se_fock_matrix_exchange.F se_fock_matrix_integrals.F
semi_empirical_expns3_methods.F semi_empirical_expns3_types.F
semi_empirical_int3_utils.F semi_empirical_int_ana.F
semi_empirical_int_arrays.F semi_empirical_int_debug.F
semi_empirical_int_gks.F semi_empirical_int_num.F
semi_empirical_int_utils.F semi_empirical_integrals.F
semi_empirical_mpole_methods.F semi_empirical_mpole_types.F
semi_empirical_par_utils.F semi_empirical_parameters.F
semi_empirical_store_int_types.F semi_empirical_types.F
semi_empirical_utils.F shell_opt.F shell_potential_types.F
simpar_methods.F simpar_types.F soft_basis_set.F spherical_harmonics.F
splines_methods.F splines_types.F spme.F statistical_methods.F
stm_images.F sto_ng.F string_table.F string_utilities.F
structure_factor_types.F structure_factors.F subcell_types.F t_c_g0.F
taper_types.F task_list_methods.F task_list_types.F termination.F
thermal_region_types.F thermal_region_utils.F thermostat_mapping.F
thermostat_methods.F thermostat_types.F thermostat_utils.F timings.F
timings_mp.F topology.F topology_amber.F topology_cif.F
topology_connectivity_util.F topology_constraint_util.F
topology_coordinate_util.F topology_cp2k.F topology_generate_util.F
topology_gromos.F topology_input.F topology_multiple_unit_cell.F
topology_pdb.F topology_psf.F topology_types.F topology_util.F
topology_xtl.F topology_xyz.F util.F velocity_verlet_control.F
vibrational_analysis.F virial_methods.F virial_types.F whittaker.F
wiener_process.F xas_control.F xas_env_types.F xas_methods.F
xas_restart.F xas_tp_scf.F xc.F xc_adiabatic_methods.F
xc_adiabatic_utils.F xc_atom.F xc_b97.F xc_cs1.F xc_derivative_desc.F
xc_derivative_set_types.F xc_derivative_types.F xc_derivatives.F
xc_exchange_gga.F xc_functionals_utilities.F xc_hcth.F xc_ke_gga.F
xc_lyp.F xc_lyp_adiabatic.F xc_optx.F xc_pade.F xc_pbe.F xc_perdew86.F
xc_perdew_wang.F xc_perdew_zunger.F xc_pot_saop.F
xc_rho_cflags_types.F xc_rho_set_types.F xc_tfw.F xc_thomas_fermi.F
xc_tpss.F xc_vwn.F xc_xalpha.F xc_xbecke88.F xc_xbecke88_long_range.F
xc_xbecke88_lr_adiabatic.F xc_xbecke_roussel.F
xc_xbr_pbe_lda_hole_t_c_lr.F xc_xlda_hole_t_c_lr.F
xc_xpbe_hole_t_c_lr.F xc_xwpbe.F xray_diffraction.F
machine_gfortran.F /home/isaak2/cp2k/makefiles/../src/lib/fast.F /home/
isaak2/cp2k/makefiles/../src/lib/grid_fast.F /home/isaak2/cp2k/
makefiles/../src/lib/lib_kinds.F /home/isaak2/cp2k/makefiles/../src/
fft_lib/ctrig.F /home/isaak2/cp2k/makefiles/../src/fft_lib/
fft_kinds.F /home/isaak2/cp2k/makefiles/../src/fft_lib/fft_lib.F /home/
isaak2/cp2k/makefiles/../src/fft_lib/fft_plan.F /home/isaak2/cp2k/
makefiles/../src/fft_lib/fftacml_lib.F /home/isaak2/cp2k/makefiles/../
src/fft_lib/fftcu_lib.F /home/isaak2/cp2k/makefiles/../src/fft_lib/
fftessl_lib.F /home/isaak2/cp2k/makefiles/../src/fft_lib/fftmkl_lib.F /
home/isaak2/cp2k/makefiles/../src/fft_lib/fftpre.F /home/isaak2/cp2k/
makefiles/../src/fft_lib/fftrot.F /home/isaak2/cp2k/makefiles/../src/
fft_lib/fftsci_lib.F /home/isaak2/cp2k/makefiles/../src/fft_lib/
fftsg_lib.F /home/isaak2/cp2k/makefiles/../src/fft_lib/fftstp.F /home/
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dbcsr_c_mpi_calls.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_config.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_cuda_memory.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_cuda_methods.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_cuda_operations.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_cuda_types.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_data_methods.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_data_operations.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_dist_operations.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_error_handling.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_example_1.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_example_2.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
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dbcsr_internal_operations.F /home/isaak2/cp2k/makefiles/../src/
dbcsr_lib/dbcsr_io.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_iterator_operations.F /home/isaak2/cp2k/makefiles/../src/
dbcsr_lib/dbcsr_kinds.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_machine.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_message_passing.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_methods.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_mp_operations.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_plasma_interface.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_pq_methods.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_pq_types.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_test_add.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_test_methods.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_test_multiply.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_test_driver.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_types.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_operations.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dbcsr_performance_driver.F /home/isaak2/cp2k/makefiles/../src/
dbcsr_lib/dbcsr_performance_multiply.F /home/isaak2/cp2k/makefiles/../
src/dbcsr_lib/dbcsr_ptr_util.F /home/isaak2/cp2k/makefiles/../src/
dbcsr_lib/dbcsr_transformations.F /home/isaak2/cp2k/makefiles/../src/
dbcsr_lib/dbcsr_work_operations.F /home/isaak2/cp2k/makefiles/../src/
dbcsr_lib/dbcsr_util.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
dummy_c_bindings.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/
min_heap.F /home/isaak2/cp2k/makefiles/../src/dbcsr_lib/smm.F
cp_common_uses.h cp2k.F cp2k_shell.F > /home/isaak2/cp2k/makefiles/../
obj/Linux-x86-64-gfortran/sopt/all.dep || ( rm -f /home/isaak2/cp2k/
makefiles/../obj/Linux-x86-64-gfortran/sopt/all.dep  ; exit 1 )
/bin/sh: /home/isaak2/cp2k/makefiles/../obj/Linux-x86-64-gfortran/sopt/
all.dep: No such file or directory
make[1]: *** [all.dep] Error 1
make[1]: Leaving directory `/home/isaak2/cp2k/src'
make: *** [build] Error 2




The response from the command is

Linux-x86-64-pgi.

On Aug 29, 2:33 am, Urban Borštnik <urban.b... at gmail.com> wrote:
> Hello,
>
> On Fri, 2011-08-26 at 12:45 -0700, Isaak Daniels wrote:
> > Installation stops when the compiler notes that all.dep wasn't found
> > under the directory of the computer type. What are the possible
> > problems that caused this? I have it so that the computer architecture
> > is guessed by the program.
>
> The all.dep file is generated by a separate program that is included in
> the cp2k distribution.  The processes usually works automatically, but
> in some cases it may fail.
>
> Which CP2K version are you trying to compile?  Could you post or send
> the entire make output?  Also, what does the command
> "../tools/get_arch_code" return, run from the src directory?
>
> Regards,
> Urban


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