[CP2K:2971] Re: Lowdin analysis
Manh-Thuong Nguyen
manht... at gmail.com
Mon Dec 6 10:03:25 UTC 2010
Hi Matthias,
Many thanks for your suggestion.
It is really basis set dependent. I've tried again with most basis sets I
have, only the MOLOPT-SR types can give me some "right physics" results.
Btw, could you please tell me some technical papers about this problem?
Thanks again,
Manh
On Sun, Dec 5, 2010 at 3:06 PM, Matthias Krack <matthia... at psi.ch>wrote:
> Hi Manh,
>
> population analyses are known to be very sensible to the basis set
> choice. I guess also in this case the TZV2P MOLOPT basis set is the
> reason for the unexpected result. The MOLOPT basis sets include
> relatively small exponents which might cause linear dependencies in
> the overlap matrix. The Lowdin population analysis requires the
> calculation of S**(1/2) which involves (in CP2K) a diagonalisation of
> the overlap matrix. However, an ill-conditioned overlap matrix will
> most likely result in a weird charge partition. Therefore, I would
> suggest to employ different basis sets, e.g. the MOLOPT-SR or the DZVP/
> TZVP basis sets.
>
> Best,
>
> Matthias
>
> On 3 Dez., 17:46, Manh <manht... at gmail.com> wrote:
> > Hello everyone,
> >
> > I calculate the Mulliken and Lowdin charges for a water molecule. The
> > results are:
> >
> > ----------------------------------------------------------------
> >
> > MULLIKEN POPULATION ANALYSIS
> >
> > # Atom Element Kind Atomic population Net charge
> > 1 H 1 0.780838 0.219162
> > 2 H 1 0.780981 0.219019
> > 3 O 2 6.438182 -0.438182
> > # Total charge 8.000000 0.000000
> >
> > LOWDIN POPULATION ANALYSIS
> >
> > # Atom Element Kind Atomic population Net charge
> > 1 H 1 1.210449 -0.210449
> > 2 H 1 1.210473 -0.210473
> > 3 O 2 5.579079 0.420921
> > # Total charge 8.000000 0.000000
> >
> > --------------------------------------------------------
> >
> > I think that the Lowdin analysis has some problem.
> >
> > Here is my input:
> >
> > ---------------------------------------------
> >
> > &FORCE_EVAL
> > METHOD Quickstep
> > &DFT
> > BASIS_SET_FILE_NAME ../../../BASIS_MOLOPT
> > POTENTIAL_FILE_NAME ../../../GTH_POTENTIALS
> > RESTART_FILE_NAME H2O-RESTART.wfn.wfn
> > &QS
> > METHOD GPW
> > EXTRAPOLATION ASPC
> > EXTRAPOLATION_ORDER 3
> > &END QS
> > &MGRID
> > CUTOFF 400
> > NGRIDS 5
> > &END
> > &SCF
> > MAX_SCF 20
> > SCF_GUESS RESTART
> > EPS_SCF 1.0E-6
> > &OT
> > PRECONDITIONER FULL_SINGLE_INVERSE
> > MINIMIZER CG
> > &END
> > &OUTER_SCF
> > MAX_SCF 10
> > EPS_SCF 1.0E-6
> > &END
> > &PRINT
> > &RESTART
> > &EACH
> > QS_SCF 0
> > GEO_OPT 2
> > &END
> > ADD_LAST NUMERIC
> > FILENAME RESTART.wfn
> > &END
> > &RESTART_HISTORY OFF
> > &END
> > &END
> > &END SCF
> >
> > &XC
> > &XC_FUNCTIONAL PBE
> > &END XC_FUNCTIONAL
> > &END XC
> >
> > &PRINT
> > &MULLIKEN
> > &END MULLIKEN
> >
> > &LOWDIN
> > &END LOWDIN
> > &END
> >
> > &END DFT
> > &SUBSYS
> > &CELL
> > ABC [angstrom] 30 30 30
> > &END CELL
> > &TOPOLOGY
> > COORD_FILE_NAME water.xyz
> > COORDINATE xyz
> > &END
> >
> > &KIND O
> > BASIS_SET TZV2P-MOLOPT-GTH
> > POTENTIAL GTH-PBE-q6
> > &END KIND
> > &KIND H
> > BASIS_SET TZV2P-MOLOPT-GTH
> > POTENTIAL GTH-PBE-q1
> > &END KIND
> >
> > &END SUBSYS
> >
> > &END FORCE_EVAL
> >
> > &GLOBAL
> > PRINT_LEVEL LOW
> > PROJECT H2O
> > RUN_TYPE ENERGY
> > WALLTIME 285000
> > &END GLOBAL
> >
> > &MOTION
> > &GEO_OPT
> > MAX_ITER 5000
> > MAX_FORCE 0.00010
> > OPTIMIZER BFGS
> > &BFGS
> > &END
> > &END
> > &END
> >
> > ------------------------------------------------
> > the water.xyz file is
> > ----------------------------------------
> > 3
> > water
> > H 8.4351137971 5.1620318678 12.1510352783
> > H 8.5534822942 3.6347695084 12.1803075532
> > O 7.9011326518 4.3528437024 12.1874564118
> > ------------------------------------------------
> >
> > Regards,
> > Manh
>
> --
> You received this message because you are subscribed to the Google Groups
> "cp2k" group.
> To post to this group, send email to cp... at googlegroups.com.
> To unsubscribe from this group, send email to
> cp2k+uns... at googlegroups.com <cp2k%2Bun... at googlegroups.com>.
> For more options, visit this group at
> http://groups.google.com/group/cp2k?hl=en.
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20101206/e4738e23/attachment.htm>
More information about the CP2K-user
mailing list