[CP2K:567] Re: Cygwin port to windows command-line

Jack Shultz jackyg... at gmail.com
Sun Jan 13 20:18:20 UTC 2008


Looks like they are going to give me a fee waiver for Amber, plus I'm
optimistic since they are telling me they are moving towards a license that
will allow grid computing project such as mine.

I also got to chating with Gromacs folk and they tell me there is a a GPL
mopack version which would allow me to try some of the analysis I'm
proposing.

I may be superfically looking at a bunch of these chemistry packages for
now. When I feel confident about one, I'll get more meticulous about all the
examples as you point out. For now I am try to at least stumble around.

Jack


On 1/13/08, Jack Shultz <jackyg... at gmail.com> wrote:
>
> Thank you Axel,
>
> Actually it is a necessary complication to implement on windows. I have to
> answer two questions immediately:
> 1) Whether this is an appropriate application for modeling reactions
> 2) Whether it is feasible to integrate into my DC project. Like it or not,
> windows computers are the dominant platform
>
> If I don't have answers to these two questions, I may regret spending lots
> of time understanding how it works and designing my own simulation.
>
> Jack
>
> On 1/13/08, Axel <akoh... at gmail.com> wrote:
> >
> >
> >
> >
> > On Jan 13, 5:07 am, "Jack Shultz" <jackyg... at gmail.com > wrote:
> > > Hello,
> > >
> > > I am attempting to port the cygwin platform to windows command line.
> > I've
> > > done this with several other scientific apps by including the
> > necessary
> > > cygwin DLLs in the directory of the binary. But I get this error with
> > CP2k.
> > > I've also tried changing the stack size
> >
> > jack,
> >
> > this looks like an error in the input (or a problem with the input
> > parser).
> > what is the input file?
> >
> > i also suspect that there is nobody around here with significant
> > experience (or interest) to debug cp2k on windows machines
> > (it is _so_ much easier to run on linux). cp2k is rather demanding
> > in terms of standards compliance and correctness of the compilers,
> > libraries and input, that i'd strongly suggest to first try to get
> > started
> > with a linux machine (or virtual machine) and have one of those always
> > ready to cross check. i generally compile/test on two different
> > platforms
> > and with two different compilers, to make sure that when i suspect a
> > bug in cp2k, that is is not a bug in the compiler or library that is
> > being
> > exposed by cp2k. this has happened to me and others quite often.
> >
> > trying this on windows is simply adding unnecessary complications,
> > IMO.
> >
> > cheers,
> >    axel.
> > >
> > > C:\Program Files\Microsoft Visual Studio 8\VC\bin>editbin
> > /STACK:33554432
> > > cp2k.s
> > > opt
> > > Microsoft (R) COFF/PE Editor Version 8.00.50727.42
> > > Copyright (C) Microsoft Corporation.  All rights reserved.
> > >
> > > Run time error:
> > >
> > >  ===== Routine Calling Stack =====
> > >
> > >             5 coordinate_control
> > >             4 topology_control
> > >             3 fist_init
> > >             2 fist_create_force_env
> > >             1 CP2K
> > >  CP2K| Abnormal program termination, stopped by process number 0
> > >     370 [sig] cp2k.sopt 288 open_stackdumpfile: Dumping stack trace to
> > > cp2k.sopt
> > > .stackdump
> > >
> > > C:\cygwin\usr\src\cp2k\exe\Cygwin-i686-g95>
> > > >
> >
>
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