Hello everyone,<br />I hope you are doing well.<br /><br />I am running calculations in a cluster that constrains them to 3 days per job; after these 3 days, I need to rerun the simulation from their last checkpoint.<br /><br />CP2K generates a restart file during the simulation process, which is used by the graph.popt program (included in the CP2K module) to save the free energy surface (FES) path in a file called fes.dat. Likewise, the same restart file can be used to continue the simulation from its last interruption (checkpoint).<br /><br />The inconvenience happens when the simulation is interrupted as the restart file only saves the simulation progress during the 3-day wall time. Hence, graph.popt can only save the fes path of the last piece of simulation. To avoid losing information, I copy the restart of the interrupted simulation to a new folder and continue the simulation in this new folder. However, graph.popt can read only one restart file, and I cannot find any way to create a restart file containing the information of the simulation (which is split into several pieces) and make it readable for graph.popt.<br /><br />I would greatly appreciate it if someone could advise me on how to compute the FES of the whole simulation properly. <br /><br />I wish you a great day, and thanks for your time,<br />Diana.<br />
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