<br />Thanks for your help!<div class="gmail_quote"><div dir="auto" class="gmail_attr">On Tuesday, March 5, 2024 at 5:02:57 AM UTC-5 Jürg Hutter wrote:<br/></div><blockquote class="gmail_quote" style="margin: 0 0 0 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">Hi
<br>
<br>you can find information on the truncation radius in the original paper by
<br>M. Guidon et al. You can also make some tests yourself.
<br>I would say as a rule of thumb: 4.5 A is in the lower range of acceptable values,
<br>6 A and above is usually save. Half the box length is another important value
<br>(see discussion in the paper).
<br>
<br>regards
<br>JH
<br>
<br>________________________________________
<br>From: <a href data-email-masked rel="nofollow">cp...@googlegroups.com</a> <<a href data-email-masked rel="nofollow">cp...@googlegroups.com</a>> on behalf of Zac Smith <<a href data-email-masked rel="nofollow">qingxi...@gmail.com</a>>
<br>Sent: Tuesday, March 5, 2024 4:26 AM
<br>To: cp2k
<br>Subject: Re: [CP2K:19996] Re: Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
<br>
<br>Dear Jürg,
<br>Thank you for the suggestion.The modification to increase the truncation radius to 4 A worked, and the calculations started running. Can you tell me how to determine the increase of the truncation radius to 4 A?
<br>
<br>
<br>Have a good day
<br>Zac
<br>
<br>On Monday, March 4, 2024 at 5:45:25 AM UTC-5 Jürg Hutter wrote:
<br>Hi
<br>
<br>your input runs on my system (48 cores, 256 GB memory).
<br>The only change I did was to increase the truncation radius to 4 A.
<br>I have some concerns on your system. It seems you have degenerate orbitals
<br>and probably degenerate excited states. A geometry optimization might need
<br>special care for these states.
<br>
<br>regards
<br>JH
<br>
<br>
<br>________________________________________
<br>From: <a href data-email-masked rel="nofollow">cp...@googlegroups.com</a> <<a href data-email-masked rel="nofollow">cp...@googlegroups.com</a>> on behalf of Zac Smith <<a href data-email-masked rel="nofollow">qingxi...@gmail.com</a>>
<br>Sent: Monday, March 4, 2024 4:02 AM
<br>To: cp2k
<br>Subject: [CP2K:19986] Re: Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
<br>
<br>
<br>Dear Frederick,
<br>I've attached the input, output files for your reference. BN__PBE.wfn is a first guess to facilitate accelerated PBE0 calculations.
<br>
<br>
<br>Have a good day
<br>Zac
<br>On Sunday, March 3, 2024 at 12:48:35 PM UTC-5 Frederick Stein wrote:
<br>Dear Zac,
<br>without providing your CP2K input file "BN.inp" and the respective output file (not the Slurm input/output files), we can only guess. Depending on the size of your system, you might be running out of memory in which case you need a larger number of compute nodes or less MPI ranks per node while increasing the number of OpenMP threads appropriately. It could also be a bug which we can only identify if you provide the CP2K input and output files.
<br>Best,
<br>Frederick
<br>
<br>Zac Smith schrieb am Sonntag, 3. März 2024 um 06:06:08 UTC+1:
<br>Dear CP2K Community.
<br>I'm running a job to optimize the calculation of excited states of a periodic system and I encountered this error Program received signal SIGSEGV: Segmentation fault - invalid memory reference. Do you have any suggestions for changes to avoid this error? I am attaching the submitted submit file and slurm.out file for your reference. Thanks.
<br>
<br>--
<br>You received this message because you are subscribed to the Google Groups "cp2k" group.
<br>To unsubscribe from this group and stop receiving emails from it, send an email to <a href data-email-masked rel="nofollow">cp2k+uns...@googlegroups.com</a><mailto:<a href data-email-masked rel="nofollow">cp2k+uns...@googlegroups.com</a>>.
<br>To view this discussion on the web visit <a href="https://groups.google.com/d/msgid/cp2k/75fe5d2d-85f3-4218-8300-b1362718c950n%40googlegroups.com" target="_blank" rel="nofollow" data-saferedirecturl="https://www.google.com/url?hl=en&q=https://groups.google.com/d/msgid/cp2k/75fe5d2d-85f3-4218-8300-b1362718c950n%2540googlegroups.com&source=gmail&ust=1709779841860000&usg=AOvVaw2Pj-2m7OrQf0Rrj2TgQqRs">https://groups.google.com/d/msgid/cp2k/75fe5d2d-85f3-4218-8300-b1362718c950n%40googlegroups.com</a><<a href="https://groups.google.com/d/msgid/cp2k/75fe5d2d-85f3-4218-8300-b1362718c950n%40googlegroups.com?utm_medium=email&utm_source=footer" target="_blank" rel="nofollow" data-saferedirecturl="https://www.google.com/url?hl=en&q=https://groups.google.com/d/msgid/cp2k/75fe5d2d-85f3-4218-8300-b1362718c950n%2540googlegroups.com?utm_medium%3Demail%26utm_source%3Dfooter&source=gmail&ust=1709779841861000&usg=AOvVaw0KqpOh5bs0r--OE3T6nS0-">https://groups.google.com/d/msgid/cp2k/75fe5d2d-85f3-4218-8300-b1362718c950n%40googlegroups.com?utm_medium=email&utm_source=footer</a>>.
<br>
<br>--
<br>You received this message because you are subscribed to the Google Groups "cp2k" group.
<br>To unsubscribe from this group and stop receiving emails from it, send an email to <a href data-email-masked rel="nofollow">cp2k+uns...@googlegroups.com</a><mailto:<a href data-email-masked rel="nofollow">cp2k+uns...@googlegroups.com</a>>.
<br>To view this discussion on the web visit <a href="https://groups.google.com/d/msgid/cp2k/90b58263-ec08-4165-ba9c-9453aebcc5b2n%40googlegroups.com" target="_blank" rel="nofollow" data-saferedirecturl="https://www.google.com/url?hl=en&q=https://groups.google.com/d/msgid/cp2k/90b58263-ec08-4165-ba9c-9453aebcc5b2n%2540googlegroups.com&source=gmail&ust=1709779841861000&usg=AOvVaw11Pi2KmKHSk1EBzI8VApvB">https://groups.google.com/d/msgid/cp2k/90b58263-ec08-4165-ba9c-9453aebcc5b2n%40googlegroups.com</a><<a href="https://groups.google.com/d/msgid/cp2k/90b58263-ec08-4165-ba9c-9453aebcc5b2n%40googlegroups.com?utm_medium=email&utm_source=footer" target="_blank" rel="nofollow" data-saferedirecturl="https://www.google.com/url?hl=en&q=https://groups.google.com/d/msgid/cp2k/90b58263-ec08-4165-ba9c-9453aebcc5b2n%2540googlegroups.com?utm_medium%3Demail%26utm_source%3Dfooter&source=gmail&ust=1709779841861000&usg=AOvVaw262qhmFTtN3-gT6GxOiXV4">https://groups.google.com/d/msgid/cp2k/90b58263-ec08-4165-ba9c-9453aebcc5b2n%40googlegroups.com?utm_medium=email&utm_source=footer</a>>.
<br></blockquote></div>
<p></p>
-- <br />
You received this message because you are subscribed to the Google Groups "cp2k" group.<br />
To unsubscribe from this group and stop receiving emails from it, send an email to <a href="mailto:cp2k+unsubscribe@googlegroups.com">cp2k+unsubscribe@googlegroups.com</a>.<br />
To view this discussion on the web visit <a href="https://groups.google.com/d/msgid/cp2k/da012d6f-b4b9-4d21-b153-809780bb84e6n%40googlegroups.com?utm_medium=email&utm_source=footer">https://groups.google.com/d/msgid/cp2k/da012d6f-b4b9-4d21-b153-809780bb84e6n%40googlegroups.com</a>.<br />