Dear Matthias,<div><br /></div><div>Thank you very much for your answer. I will surely try it.</div><div><br /></div><div>Best,</div><div><br /></div><div>Vittorio<br /><br /></div><div class="gmail_quote"><div dir="auto" class="gmail_attr">Il giorno mercoledì 18 ottobre 2023 alle 16:39:43 UTC+2 Krack Matthias ha scritto:<br/></div><blockquote class="gmail_quote" style="margin: 0 0 0 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">
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<p class="MsoNormal"><span lang="DE-CH" style="font-size:11.0pt">Dear Vittorio<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="DE-CH" style="font-size:11.0pt"><u></u> <u></u></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt">a CP2K input file for 32 TIP3P water molecules is attached.<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt">I plan to provide template CP2K inputs for the common 3- and 4-site rigid and flexible water models in the CP2K data folder soon. I will announce that here when done.<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt"><u></u> <u></u></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt">HTH<u></u><u></u></span></p>
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<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt">Matthias<u></u><u></u></span></p>
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<b><span style="font-size:12.0pt;color:black">From: </span></b><span style="font-size:12.0pt;color:black">'Vittorio Bariosco' via cp2k <<a href data-email-masked rel="nofollow">cp...@googlegroups.com</a>><br>
<b>Date: </b>Tuesday, 17 October 2023 at 17:19<br>
<b>To: </b>cp2k <<a href data-email-masked rel="nofollow">cp...@googlegroups.com</a>><br>
<b>Subject: </b>[CP2K:19377] Optimizing with TIP3P a water cluster model<u></u><u></u></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt">Dear CP2K users,<u></u><u></u></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt">I have been through different threads on this forum to understand how to optimize a cluster of 600 hundred atoms (see <a href="http://0_tip3p_geom.xyz" target="_blank" rel="nofollow" data-saferedirecturl="https://www.google.com/url?hl=it&q=http://0_tip3p_geom.xyz&source=gmail&ust=1697726509179000&usg=AOvVaw32Qjrfmj5L_fvnDsRWcCVh">0_tip3p_geom.xyz</a>) with TIP3P model.<u></u><u></u></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt">1)I firstly tried this input taken from the FIST repository on GitHub
<a href="https://github.com/cp2k/cp2k/blob/master/tests/Fist/regtest-4/H2O-1.inp" target="_blank" rel="nofollow" data-saferedirecturl="https://www.google.com/url?hl=it&q=https://github.com/cp2k/cp2k/blob/master/tests/Fist/regtest-4/H2O-1.inp&source=gmail&ust=1697726509179000&usg=AOvVaw08BnQSUevU3g1nY0lr8syP">
here</a><u></u><u></u></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt">(see first_tip3p.inp) but I was always getting this error after the Optimization starts:<u></u><u></u></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt;color:black;background:white">"</span><span style="font-size:11.0pt;font-family:Menlo;color:black;background:white">WARNING| Particles: 600 598 at distance [au]: 1.82837959
less than: 2.00430963; increase EMAX_SPLINE.</span><span style="font-size:11.0pt"><u></u><u></u></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt;font-family:Menlo;color:black;background:white">GEOMETRY wrong or EMAX_SPLINE too small!</span><span style="font-size:11.0pt;color:black">"</span><span style="font-size:11.0pt"><u></u><u></u></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt;color:black">2)The I moved to the other input reported in the same repository at this
<a href="https://github.com/cp2k/cp2k/blob/master/tests/Fist/regtest-4/H2O-32_SPME_fp.inp." target="_blank" rel="nofollow" data-saferedirecturl="https://www.google.com/url?hl=it&q=https://github.com/cp2k/cp2k/blob/master/tests/Fist/regtest-4/H2O-32_SPME_fp.inp.&source=gmail&ust=1697726509179000&usg=AOvVaw1T4Ac9St8i0tJZfersM6V-">
link</a>, w</span><span style="font-size:11.0pt">here more water molecules were included in the initial geometry. In this case (see second_tip3p.inp), the optimization starts but at a certain point it crashes again with a similar error: <u></u><u></u></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt;color:black;background:white">"</span><span style="font-size:11.0pt;font-family:Menlo;color:black;background:white">WARNING| Particles: 600 598 at distance [au]: 0.89796367
less than: 0.95400000; increase EMAX_SPLINE.</span><span style="font-size:11.0pt;color:black;background:white">"</span><span style="font-size:11.0pt"><u></u><u></u></span></p>
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<span style="font-family:Menlo;color:black;background:white">GEOMETRY wrong or EMAX_SPLINE too small! </span><span style="font-family:Menlo"><u></u><u></u></span></p>
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At this point I am a little confused on how to proceed. I remembered that tip3p is a rigid FF and I started to look for constraining options for intramolecular distances and angles. I found in the same input of the above the section <span style="font-family:Menlo;color:black;background:white">&CONSTRAINT &G3X3.</span><u></u><u></u></p>
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3) Thus, I defined the new input using this constrain that could probably explains the reason why CP2K was crushing before in this way (see third_tip3p.inp). However, also this test was unsuccessful with the following error:<u></u><u></u></p>
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"<span style="font-family:Menlo;color:black;background:white"> | Error in constraints setup!</span><u></u><u></u></p>
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<span style="font-family:Menlo;color:black;background:white"> | A constraint has been defined for a molecule type</span><span style="font-family:Menlo"><u></u><u></u></span></p>
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<span style="font-family:Menlo;color:black;background:white"> | but the atoms specified in the constraint and the atoms defined for</span><span style="font-family:Menlo"><u></u><u></u></span></p>
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<span style="font-family:Menlo;color:black;background:white"> | the molecule DO NOT match!</span><span style="font-family:Menlo"><u></u><u></u></span></p>
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<span style="font-family:Menlo;color:black;background:white"> | This could be very probable due to a wrong connectivity, or an error</span><span style="font-family:Menlo"><u></u><u></u></span></p>
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<span style="font-family:Menlo;color:black;background:white"> | in the constraint specification in the input file.</span><span style="font-family:Menlo"><u></u><u></u></span></p>
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<span style="font-family:Menlo;color:black;background:white"> | Please check it carefully!</span>"<u></u><u></u></p>
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Moreover, I also found in another thread <a href="https://groups.google.com/g/cp2k/c/ld5pmmYUnBk/m/iZte7XZGBwAJ" target="_blank" rel="nofollow" data-saferedirecturl="https://www.google.com/url?hl=it&q=https://groups.google.com/g/cp2k/c/ld5pmmYUnBk/m/iZte7XZGBwAJ&source=gmail&ust=1697726509179000&usg=AOvVaw00cbUfL3GB6m3C4wugP3eS">here</a>, that the specified constrained keyword works only for MD runs and not for GEO_OPT or CELL_OPT. <u></u><u></u></p>
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At the moment I don't have any clue in how to proceed to obtain a optimized geometry with tip3p model. For this reason I would like to ask if anybody have ever optimized with tip3p model, or can help me for setting the proper input.<u></u><u></u></p>
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Hope to hear from you.<u></u><u></u></p>
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Kindly,<u></u><u></u></p>
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Vittorio<u></u><u></u></p>
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