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Dear <font style="font-size: 11pt;" size="2"><span lang="en-US">Matthias</span></font><font style="font-size: 11pt;" size="2"><span lang="en-US"><u>,</u></span></font></p>
<p style="margin-bottom: 0in; line-height: 100%;"><font style="font-size: 11pt;" size="2"><span lang="en-US"><span style="text-decoration: none;">Thank
you for your suggestion. </span></span></font><font style="font-size: 11pt;" size="2"><span lang="en-US"><span style="text-decoration: none;">I
was already using </span></span></font><span style="text-decoration: none;">“</span><font style="font-size: 11pt;" size="2"><span lang="en-US"><span style="text-decoration: none;">ulimit
-s unlimited”, but adding “export OMP_STACKSIZE=16M” didn’t
help and I’m still getting the same segmentation fault. I’m
including my submission script on CSCS cluster to provide all
the settings for the cp2k run.</span></span></font></p>
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<p style="margin-bottom: 0in; line-height: 100%;"><font style="font-size: 11pt;" size="2"><span lang="en-US"><span style="text-decoration: none;">Best
wishes,</span></span></font></p>
<p style="margin-bottom: 0in; line-height: 100%;"><font style="font-size: 11pt;" size="2"><span lang="en-US"><span style="text-decoration: none;">Vladislav</span></span></font></p>

<div class="gmail_quote"><div dir="auto" class="gmail_attr">Dne středa 24. května 2023 v 9:06:47 UTC+2 uživatel Krack Matthias napsal:<br/></div><blockquote class="gmail_quote" style="margin: 0 0 0 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">





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<p class="MsoNormal"><span lang="DE-CH" style="font-size:11.0pt">Hi Vladislav<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="DE-CH" style="font-size:11.0pt"><u></u> <u></u></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt">Segmentation faults are often caused by an insufficient stack size. Try to set (assuming bash) “ulimit -s unlimited” and “export OMP_STACKSIZE=16M” before launching
 the cp2k run.<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt"><u></u> <u></u></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt">HTH<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt"><u></u> <u></u></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt">Matthias<u></u><u></u></span></p></div></div><div lang="en-CH" link="blue" vlink="purple" style="word-wrap:break-word"><div>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt"><u></u> <u></u></span></p>
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<b><span style="font-size:12.0pt;color:black">From: </span></b><span style="font-size:12.0pt;color:black"><a href data-email-masked rel="nofollow">cp...@googlegroups.com</a> <<a href data-email-masked rel="nofollow">cp...@googlegroups.com</a>> on behalf of Vladislav Sláma <<a href data-email-masked rel="nofollow">sla...@gmail.com</a>><br>
<b>Date: </b>Tuesday, 23 May 2023 at 18:36<br>
<b>To: </b>cp2k <<a href data-email-masked rel="nofollow">cp...@googlegroups.com</a>><br>
<b>Subject: </b>[CP2K:18833] Dipole moment segmentation fault<u></u><u></u></span></p>
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Dear all,<u></u><u></u></p>
<p style="margin-right:0cm;margin-bottom:0cm;margin-left:36.0pt">
I’m trying to simulate optical spectra and plasmon resonance for different gold cluster sizes. In order to do that, I’m employing real time propagation after initial delta-pulse kick. For the smaller particle sizes (up to ~114 atoms) everything works well and
 I get reasonable spectra. However for the larger nanoparticle (178 atoms) I’m getting segmentation fault due to the calculation of the dipole moments. When I do not compute and print dipole moments, the real time propagation goes well without any problem.
 Could you please suggest me how to compute the dipole moment during the real time propagation to avoid this problem?<u></u><u></u></p>
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<u></u> <u></u></p>
<p style="margin-right:0cm;margin-bottom:0cm;margin-left:36.0pt">
Thank you. Best wishes,<u></u><u></u></p>
<p style="margin-right:0cm;margin-bottom:0cm;margin-left:36.0pt">
Vladislav<u></u><u></u></p>
</div></div><div lang="en-CH" link="blue" vlink="purple" style="word-wrap:break-word"><div><p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt">--
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