Thank you all for reply!<div><br /></div><div>Dear Matthias, I got this error with ulimit -s unlimited settings. </div><div><br /></div><div>Dear
Tieyuan BIAN, can you please help to install cp2k with toolchain. I tried many time it always give me the error of OpenBLAS. I set --with-openblas=no, still it tries to download that. Then I install default Linux-intel-minimal.psmp file in ARCH directory by changing CFLAGS= <b>O3 </b></div><div><b><br /></b></div><div><b>Can you please help to install via the toolchain or Linix-intel.psmp (not minimal) file?<br /></b><br /></div><div class="gmail_quote"><div dir="auto" class="gmail_attr">On Friday, 28 April 2023 at 12:55:49 UTC+5:30 Tieyuan Bian wrote:<br/></div><blockquote class="gmail_quote" style="margin: 0 0 0 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">Hi,<div><br></div><div>I used to meet this problem either. My cp2k version is 2022.2 and complier version is gcc 10.3. At the first time my MPI is OpenMPI with the toolchain option --with-openmpi=install. Then I had the same problem with you. I have fixed this problem by using Intel MPI. I have some advice for you:<br><br>1. First check whether you have problem of memory leak.</div><div>2. Complie cp2k again and use Intel MPI by setting --with-openmpi=no. You can install Intel MPI by yourself from intel official.</div><div><br></div><div>Tieyuan BIAN</div><div><br></div><div class="gmail_quote"><div dir="auto" class="gmail_attr">在2023年4月26日星期三 UTC+8 15:31:14<SHWETA CHOUDHARY> 写道:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div lang="EN-IN" link="blue" vlink="#954F72" style="word-wrap:break-word"><div><p class="MsoNormal"><span><span style="font-size:12.0pt">Hello everyone,<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt"><u></u> <u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">Can anybody please help me with the following error in my error file? I have recently installed cp2k 8.2 version using intel-minimal.psmp arch file with intel 2018 compiler, gcc and fftw. Please guide me with job script and compilation. <u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt"><u></u> <u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">forrtl: severe (174): SIGSEGV, segmentation fault occurred<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">Image PC Routine Line Source<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">cp2k.psmp 000000000981FE2D Unknown Unknown Unknown<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">libpthread-2.17.s 00007FE4F42D9630 Unknown Unknown Unknown<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">cp2k.psmp 0000000002D1A2C1 ps_implicit_metho 240 ps_implicit_methods.F<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">cp2k.psmp 0000000002C3DDF3 pw_poisson_method 343 pw_poisson_methods.F<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">cp2k.psmp 0000000001037104 qs_ks_methods_mp_ 438 qs_ks_methods.F<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">cp2k.psmp 00000000010357E0 qs_ks_methods_mp_ 1223 qs_ks_methods.F<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">cp2k.psmp 0000000001B23BD9 qs_scf_mp_scf_env 462 qs_scf.F<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">cp2k.psmp 0000000001B1A269 qs_scf_mp_scf_ 233 qs_scf.F<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">cp2k.psmp 00000000010A8D6F qs_energy_mp_qs_e 92 qs_energy.F<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">cp2k.psmp 0000000001919CC1 qs_force_mp_qs_ca 116 qs_force.F<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">cp2k.psmp 000000000117BA3A force_env_methods 271 force_env_methods.F<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">cp2k.psmp 0000000000667A1C cp2k_runs_mp_run_ 352 cp2k_runs.F<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">cp2k.psmp 000000000065E192 MAIN__ 357 cp2k.F<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">cp2k.psmp 000000000065D50E Unknown Unknown Unknown<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt"><a href="http://libc-2.17.so" rel="nofollow" target="_blank" data-saferedirecturl="https://www.google.com/url?hl=en-GB&q=http://libc-2.17.so&source=gmail&ust=1683181399020000&usg=AOvVaw0FFwJHujgXCxc7WDBZmjV7">libc-2.17.so</a> 00007FE4F3839555 __libc_start_main Unknown Unknown<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">cp2k.psmp 000000000065D429 Unknown Unknown Unknown<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">srun: Job 113192 step creation still disabled, retrying (Requested nodes are busy)<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">srun: Job 113192 step creation still disabled, retrying (Requested nodes are busy)<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">srun: Job 113192 step creation still disabled, retrying (Requested nodes are busy)<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">srun: Job 113192 step creation still disabled, retrying (Requested nodes are busy)<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">srun: Job 113192 step creation still disabled, retrying (Requested nodes are busy)<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">srun: Job 113192 step creation still disabled, retrying (Requested nodes are busy)<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">srun: Job 113192 step creation still disabled, retrying (Requested nodes are busy)<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">srun: Step created for job 113192<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">srun: Job 113192 step creation still disabled, retrying (Requested nodes are busy)<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">srun: Job 113192 step creation still disabled, retrying (Requested nodes are busy)<u></u><u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt"><u></u> <u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt"><u></u> <u></u></span></span></p><p class="MsoNormal"><span><span style="font-size:12.0pt">Many thanks!<u></u><u></u></span></span></p></div></div></blockquote></div></blockquote></div>
<p></p>
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