NVE with ANNEALING 0.05 @ 100.0 K goes completely haywire with unphysical results in the geometry (atoms clumping together, too close for realistic bonding)<div><br /></div><div>I'm sorry if I'm overlooking general things about MD and this is not the place to ask, but what is going on ?<br /><br /></div><div class="gmail_quote"><div dir="auto" class="gmail_attr">On Saturday, January 14, 2023 at 1:38:38 PM UTC+2 Dobromir A Kalchevski wrote:<br/></div><blockquote class="gmail_quote" style="margin: 0 0 0 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">@ 10.0K the program exits with the same error as before. @100.0K with and without TEMP_TOL 10 or 100 the system still explodes and the program runs at 1 core.<br><br><div class="gmail_quote"><div dir="auto" class="gmail_attr">On Saturday, January 14, 2023 at 1:28:50 PM UTC+2 Dobromir A Kalchevski wrote:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">I guess I had forgotten to include a BAROSTAT (this is my first MD) ... now there is no error. After all an NPT_I must have a barostat. Still, now the system runs on only 1 core after about 50 steps (I think when the temperature starts going up) and the calculation is extremely slow. cp2k never needed OMP_NUM_THREADS before and even after I set it it still runs on 1 core. What settings should I change.<div><br></div><div>Also, the system exploded (the atoms are all over the place) - wasn't NPT supposed to NOT do that ?<br><div><br></div><div>This is what I included:</div><div> &BAROSTAT<br> PRESSURE 1.0000000000000000E+00<br> TIMECON 100 <br> &THERMOSTAT<br> &NOSE<br> LENGTH 3<br> YOSHIDA 3<br> TIMECON 100.0<br> MTS 2<br> &END NOSE<br> &END<br> &END BAROSTAT<br><div><br></div></div><div>Best Regards,</div><div>Dobromir</div><div><br></div></div><div class="gmail_quote"><div dir="auto" class="gmail_attr">On Saturday, January 14, 2023 at 12:29:20 AM UTC+2 Dobromir A Kalchevski wrote:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">Hello,<div><br></div><div>I'm trying a DFTB NPT_I calculation and I used the tutorial (<a href="https://www.cp2k.org/exercises:2015_cecam_tutorial:mtd1" rel="nofollow" target="_blank" data-saferedirecturl="https://www.google.com/url?hl=en&q=https://www.cp2k.org/exercises:2015_cecam_tutorial:mtd1&source=gmail&ust=1673782719515000&usg=AOvVaw0tmOgHS7Xbut7vpWm1dW5H">https://www.cp2k.org/exercises:2015_cecam_tutorial:mtd1</a>) to set it up. I get the following error after the 0-th step in the .ener file:<br><br></div><div>Writing TRAJECTORY 1_0 to QD-pos-1.xyz<br><br> *******************************************************************************<br> * ___ *<br> * / \ *<br> * [ABORT] *<br> * \___/ CPASSERT failed *<br> * | *<br> * O/| *<br> * /| | *<br> * / \ pw/pw_grid_info.F:195 *<br> *******************************************************************************<br><br><br> ===== Routine Calling Stack ===== <br><br> 7 pw_grid_setup<br> 6 pw_env_rebuild<br> 5 qs_env_rebuild_pw_env<br> 4 qs_forces<br> 3 velocity_verlet<br> 2 qs_mol_dyn_low<br> 1 CP2K<br></div><div><br></div><div>Can you please help me out ?</div><div><br></div><div>I am attaching the input and the geometry</div><div><br></div><div>Thanx in advance,</div><div>Dobromir</div></blockquote></div></blockquote></div></blockquote></div>
<p></p>
-- <br />
You received this message because you are subscribed to the Google Groups "cp2k" group.<br />
To unsubscribe from this group and stop receiving emails from it, send an email to <a href="mailto:cp2k+unsubscribe@googlegroups.com">cp2k+unsubscribe@googlegroups.com</a>.<br />
To view this discussion on the web visit <a href="https://groups.google.com/d/msgid/cp2k/951a3efc-8a9e-49d9-8dac-703d73d97e34n%40googlegroups.com?utm_medium=email&utm_source=footer">https://groups.google.com/d/msgid/cp2k/951a3efc-8a9e-49d9-8dac-703d73d97e34n%40googlegroups.com</a>.<br />