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<p class="MsoNormal">Hi Matthias,</p>
<p class="MsoNormal">Thank you very much,</p>
<p class="MsoNormal">Yes, setting OMP_STACKSIZE=64M works</p>
<p class="MsoNormal">Best,<br>
Geng </p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Sent from <a href="https://go.microsoft.com/fwlink/?LinkId=550986">
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<p class="MsoNormal"><o:p> </o:p></p>
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<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size:11pt" color="#000000"><b>From:</b> cp2k@googlegroups.com <cp2k@googlegroups.com> on behalf of Krack Matthias (PSI) <matthias.krack@psi.ch><br>
<b>Sent:</b> Saturday, May 7, 2022 9:15:12 PM<br>
<b>To:</b> cp2k@googlegroups.com <cp2k@googlegroups.com><br>
<b>Subject:</b> [CP2K:16920] AW: segmentation fault with intel compiler</font>
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<p class="x_MsoNormal"><span style="">Hello</span></p>
<p class="x_MsoNormal"><span style=""> </span></p>
<p class="x_MsoNormal"><span lang="EN-GB" style="">Try to set OMP_STACKSIZE=16M</span></p>
<p class="x_MsoNormal"><span lang="EN-GB" style=""> </span></p>
<p class="x_MsoNormal"><span lang="EN-GB" style="">HTH</span></p>
<p class="x_MsoNormal"><span lang="EN-GB" style=""> </span></p>
<p class="x_MsoNormal"><span lang="EN-GB" style="">Matthias</span></p>
<p class="x_MsoNormal"><span lang="EN-GB" style=""> </span></p>
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<p class="x_MsoNormal" style="margin-left:35.4pt"><b>Von:</b> cp2k@googlegroups.com <cp2k@googlegroups.com>
<b>Im Auftrag von </b>Geng Sun<br>
<b>Gesendet:</b> Samstag, 7. Mai 2022 14:56<br>
<b>An:</b> cp2k@googlegroups.com<br>
<b>Betreff:</b> [CP2K:16919] segmentation fault with intel compiler</p>
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<p class="x_MsoNormal" style="margin-left:35.4pt"> </p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">Hi</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">I’m trying to install the CP2K/v9.1 with intel compiler,
</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">I am using the provide ARCH file “Linux-x86-64-intel-minimal.psmp.”</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">Without any modification on the arch file, the compilation went very well.</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">However, when I tried to submit a job with the compiled CP2K binary, I got an segmentation fault like below.</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">I’m pretty sure that the input files for the job is correct since it can run smoothly on another computer.</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">I tried a few versions of intel compiler, including 18.04, 2020.4 and 2022.1.1. None of them works for me.</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">Is there any suggestions on how to fix this?</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">Thank you very much in advance.<br>
Best,<br>
Geng</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">forrtl: severe (174): SIGSEGV, segmentation fault occurred</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">Image              PC                Routine            Line        Source</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          0000000009771C2D  Unknown               Unknown  Unknown</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">libpthread-2.17.s  00007F4BE7912630  Unknown               Unknown  Unknown</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          0000000002CF9C30  realspace_grid_ty        1135  realspace_grid_types.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">libiomp5.so        00007F4BE7309A43  __kmp_invoke_micr     Unknown  Unknown</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">libiomp5.so        00007F4BE72CD2C6  __kmp_fork_call       Unknown  Unknown</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">libiomp5.so        00007F4BE728CBB0  __kmpc_fork_call      Unknown  Unknown</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          0000000002CF3288  realspace_grid_ty        1126  realspace_grid_types.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          0000000002CEE64F  realspace_grid_ty         711  realspace_grid_types.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          000000000100B7A9  qs_collocate_dens         966  qs_collocate_density.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          0000000001340550  qs_update_s_mstru         108  qs_update_s_mstruct.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          0000000001050BAA  qs_energy_init_mp         311  qs_energy_init.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          00000000010540F0  qs_energy_init_mp         108  qs_energy_init.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          000000000104FA52  qs_energy_mp_qs_e          84  qs_energy.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          0000000001083216  qs_force_mp_qs_fo         212  qs_force.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          0000000001081627  qs_force_mp_qs_ca         117  qs_force.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          0000000000C9DDF7  force_env_methods         271  force_env_methods.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          00000000007559DD  cp_eval_at_               146  gopt_f77_methods.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          000000000074ECE5  cp_lbfgs_optimize         650  cp_lbfgs_optimizer_gopt.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          000000000074A3DC  cp_lbfgs_optimize         840  cp_lbfgs_optimizer_gopt.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          00000000007473EB  cp_lbfgs_geo_mp_g         136  cp_lbfgs_geo.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          00000000007541EA  geo_opt_mp_cp_geo         182  geo_opt.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          000000000066AD19  cp2k_runs_mp_run_         365  cp2k_runs.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          00000000006617DC  MAIN__                    387  cp2k.F</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          000000000066091E  Unknown               Unknown  Unknown</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">libc-2.17.so       00007F4BE6E72555  __libc_start_main     Unknown  Unknown</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">cp2k.psmp          0000000000660829  Unknown               Unknown  Unknown</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US">Sent from <a href="https://go.microsoft.com/fwlink/?LinkId=550986">
Mail</a> for Windows</span></p>
<p class="x_MsoNormal" style="margin-left:35.4pt"><span lang="EN-US"> </span></p>
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