<div dir="auto">Dear cp2k users and developers<div dir="auto" style="font-family:sans-serif">While compilation of cp2k by toolchain, I encounter a problem with libxsmm. The error says that this part is installed by a different version of gnu fortran. But i checked the log files that mentioned gfortran version as 5.4.0.</div>Is there any comment?<div dir="auto">Error description is presented in the previous email.</div><div dir="auto">Thanks in advance.</div></div><div class="gmail_extra"> <div class="gmail_quote">On Apr 17, 2019 4:47 PM, "Mozhdeh Mohammadpour" <<a href="mailto:mozhdehmo...@gmail.com">mozhdehmo...@gmail.com</a>> wrote: <blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div dir="ltr"><div class="gmail_default" style="font-family:georgia,serif;font-size:large"> USE libxsmm, ONLY: libxsmm_timer_tick, libxsmm_timer_duration 1 Fatal Error: Cannot read module file ‘libxsmm.mod’ opened at (1), because it was created by a different version of GNU Fortran compilation terminated. /home/mozhdeh/cp2k/exts/dbcsr/Makefile:484: recipe for target 'dbcsr_machine.o' failed make[4]: *** [dbcsr_machine.o] Error 1 /home/mozhdeh/cp2k/tools/build_utils/fypp -n --line-marker-format=gfortran5 /home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F dbcsr_machine.F90 Makefile:135: recipe for target 'libdbcsr' failed make[3]: *** [libdbcsr] Error 2 /home/mozhdeh/cp2k/exts/Makefile.inc:16: recipe for target 'dbcsr' failed make[2]: *** [dbcsr] Error 2 make[2]: *** Waiting for unfinished jobs.... /home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F:77:10: USE libxsmm, ONLY: libxsmm_timer_tick, libxsmm_timer_duration 1 Fatal Error: Cannot read module file ‘libxsmm.mod’ opened at (1), because it was created by a different version of GNU Fortran compilation terminated. /home/mozhdeh/cp2k/exts/dbcsr/Makefile:484: recipe for target 'dbcsr_machine.o' failed make[4]: *** [dbcsr_machine.o] Error 1 Makefile:135: recipe for target 'libdbcsr' failed make[3]: *** [libdbcsr] Error 2 /home/mozhdeh/cp2k/exts/Makefile.inc:16: recipe for target 'dbcsr' failed make[2]: *** [dbcsr] Error 2 make[2]: *** Waiting for unfinished jobs.... /home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F:77:10: USE libxsmm, ONLY: libxsmm_timer_tick, libxsmm_timer_duration 1 Fatal Error: Cannot read module file ‘libxsmm.mod’ opened at (1), because it was created by a different version of GNU Fortran compilation terminated. /home/mozhdeh/cp2k/exts/dbcsr/Makefile:484: recipe for target 'dbcsr_machine.o' failed make[4]: *** [dbcsr_machine.o] Error 1 Makefile:135: recipe for target 'libdbcsr' failed make[3]: *** [libdbcsr] Error 2 /home/mozhdeh/cp2k/exts/Makefile.inc:16: recipe for target 'dbcsr' failed make[2]: *** [dbcsr] Error 2 make[2]: *** Waiting for unfinished jobs.... /home/mozhdeh/cp2k/tools/build_utils/fypp -n --line-marker-format=gfortran5 /home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F dbcsr_machine.F90 /home/mozhdeh/cp2k/tools/toolchain/install/gcc-8.3.0/bin/gfortran -c -march=native -fno-omit-frame-pointer -g -O3 -funroll-loops -I'/home/mozhdeh/cp2k/tools/toolchain/install/openblas-0.3.5/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/fftw-3.3.8/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/libint-1.1.6/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/libxc-4.3.4/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/libxsmm-1.10.0/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/gsl-2.5/include' -I/home/mozhdeh/cp2k/tools/toolchain/install/spglib-1.12.2/include -I/home/mozhdeh/cp2k/tools/toolchain/install/hdf5-1.10.4/include -I'/home/mozhdeh/cp2k/tools/toolchain/install/json_fortran-7.0.0/include' -ffree-form -std=f2008 -fimplicit-none -Werror=aliasing -Werror=ampersand -Werror=c-binding-type -Werror=intrinsic-shadow -Werror=intrinsics-std -Werror=line-truncation -Werror=tabs -Werror=target-lifetime -Werror=underflow -Werror=unused-but-set-variable -Werror=unused-variable -Werror=unused-dummy-argument -Werror=conversion -Werror=zerotrip -Werror=uninitialized -Wno-maybe-uninitialized -Wuse-without-only -D__LIBXSMM -D__FFTW3 -D__LIBINT -D__LIBINT_MAX_AM=6 -D__LIBDERIV_MAX_AM1=5 -D__LIBXC -D__HAS_smm_dnn -D__SPGLIB -D__JSON -D__SHORT_FILE__="\"dbcsr_machine_internal.F\"" -I'/home/mozhdeh/cp2k/exts/dbcsr/src/base/' -I'/home/mozhdeh/cp2k/exts/dbcsr/src' dbcsr_machine_internal.F90 mpif90 -c -march=native -fno-omit-frame-pointer -g -O3 -funroll-loops -fopenmp -I'/home/mozhdeh/cp2k/tools/toolchain/install/openmpi-3.1.3/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/openblas-0.3.5/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/fftw-3.3.8/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/libint-1.1.6/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/libxc-4.3.4/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/libxsmm-1.10.0/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/elpa-2017.05.003/include/elpa_openmp-2017.05.003/modules' -I'/home/mozhdeh/cp2k/tools/toolchain/install/elpa-2017.05.003/include/elpa_openmp-2017.05.003/elpa' -I'/home/mozhdeh/cp2k/tools/toolchain/install/gsl-2.5/include' -I/home/mozhdeh/cp2k/tools/toolchain/install/spglib-1.12.2/include -I/home/mozhdeh/cp2k/tools/toolchain/install/hdf5-1.10.4/include -I/home/mozhdeh/cp2k/tools/toolchain/install/libvdwxc-master-429a80027a2ec2c97e2f6d9a3dc84843f2739865/include -I/home/mozhdeh/cp2k/tools/toolchain/install/sirius-6.1.2/include -I'/home/mozhdeh/cp2k/tools/toolchain/install/json_fortran-7.0.0/include' -ffree-form -std=f2008 -fimplicit-none -Werror=aliasing -Werror=ampersand -Werror=c-binding-type -Werror=intrinsic-shadow -Werror=intrinsics-std -Werror=line-truncation -Werror=tabs -Werror=target-lifetime -Werror=underflow -Werror=unused-but-set-variable -Werror=unused-variable -Werror=unused-dummy-argument -Werror=conversion -Werror=zerotrip -Werror=uninitialized -Wno-maybe-uninitialized -Wuse-without-only -D__LIBXSMM -D__parallel -D__FFTW3 -D__LIBINT -D__LIBINT_MAX_AM=6 -D__LIBDERIV_MAX_AM1=5 -D__LIBXC -D__HAS_smm_dnn -D__SCALAPACK -D__ELPA=201705 -D__GSL -D__SPGLIB -D__HDF5 -D__LIBVDWXC -D__SIRIUS -D__JSON -D__SHORT_FILE__="\"dbcsr_machine.F\"" -I'/home/mozhdeh/cp2k/exts/dbcsr/src/base/' -I'/home/mozhdeh/cp2k/exts/dbcsr/src' dbcsr_machine.F90 /home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F:77:10: USE libxsmm, ONLY: libxsmm_timer_tick, libxsmm_timer_duration 1 Fatal Error: Cannot read module file ‘libxsmm.mod’ opened at (1), because it was created by a different version of GNU Fortran compilation terminated. /home/mozhdeh/cp2k/exts/dbcsr/Makefile:484: recipe for target 'dbcsr_machine.o' failed make[4]: *** [dbcsr_machine.o] Error 1 Makefile:135: recipe for target 'libdbcsr' failed make[3]: *** [libdbcsr] Error 2 /home/mozhdeh/cp2k/exts/Makefile.inc:16: recipe for target 'dbcsr' failed make[2]: *** [dbcsr] Error 2 make[2]: *** Waiting for unfinished jobs.... /home/mozhdeh/cp2k/tools/toolchain/install/gcc-8.3.0/bin/gfortran -c -march=native -fno-omit-frame-pointer -g -O3 -funroll-loops -fopenmp -I'/home/mozhdeh/cp2k/tools/toolchain/install/openblas-0.3.5/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/fftw-3.3.8/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/libint-1.1.6/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/libxc-4.3.4/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/libxsmm-1.10.0/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/gsl-2.5/include' -I/home/mozhdeh/cp2k/tools/toolchain/install/spglib-1.12.2/include -I/home/mozhdeh/cp2k/tools/toolchain/install/hdf5-1.10.4/include -I'/home/mozhdeh/cp2k/tools/toolchain/install/json_fortran-7.0.0/include' -ffree-form -std=f2008 -fimplicit-none -Werror=aliasing -Werror=ampersand -Werror=c-binding-type -Werror=intrinsic-shadow -Werror=intrinsics-std -Werror=line-truncation -Werror=tabs -Werror=target-lifetime -Werror=underflow -Werror=unused-but-set-variable -Werror=unused-variable -Werror=unused-dummy-argument -Werror=conversion -Werror=zerotrip -Werror=uninitialized -Wno-maybe-uninitialized -Wuse-without-only -D__LIBXSMM -D__FFTW3 -D__LIBINT -D__LIBINT_MAX_AM=6 -D__LIBDERIV_MAX_AM1=5 -D__LIBXC -D__HAS_smm_dnn -D__SPGLIB -D__JSON -D__SHORT_FILE__="\"dbcsr_machine.F\"" -I'/home/mozhdeh/cp2k/exts/dbcsr/src/base/' -I'/home/mozhdeh/cp2k/exts/dbcsr/src' dbcsr_machine.F90 /home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F:77:10: USE libxsmm, ONLY: libxsmm_timer_tick, libxsmm_timer_duration 1 Fatal Error: Cannot read module file ‘libxsmm.mod’ opened at (1), because it was created by a different version of GNU Fortran compilation terminated. /home/mozhdeh/cp2k/exts/dbcsr/Makefile:484: recipe for target 'dbcsr_machine.o' failed make[4]: *** [dbcsr_machine.o] Error 1 Makefile:135: recipe for target 'libdbcsr' failed make[3]: *** [libdbcsr] Error 2 /home/mozhdeh/cp2k/exts/Makefile.inc:16: recipe for target 'dbcsr' failed make[2]: *** [dbcsr] Error 2 make[2]: *** Waiting for unfinished jobs.... /home/mozhdeh/cp2k/tools/build_utils/fypp -n --line-marker-format=gfortran5 /home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F dbcsr_machine.F90 /home/mozhdeh/cp2k/tools/toolchain/install/gcc-8.3.0/bin/gfortran -c -march=native -fno-omit-frame-pointer -g -O3 -funroll-loops -I'/home/mozhdeh/cp2k/tools/toolchain/install/openblas-0.3.5/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/fftw-3.3.8/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/libint-1.1.6/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/libxc-4.3.4/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/libxsmm-1.10.0/include' -I'/home/mozhdeh/cp2k/tools/toolchain/install/gsl-2.5/include' -I/home/mozhdeh/cp2k/tools/toolchain/install/spglib-1.12.2/include -I/home/mozhdeh/cp2k/tools/toolchain/install/hdf5-1.10.4/include -I'/home/mozhdeh/cp2k/tools/toolchain/install/json_fortran-7.0.0/include' -ffree-form -std=f2008 -fimplicit-none -Werror=aliasing -Werror=ampersand -Werror=c-binding-type -Werror=intrinsic-shadow -Werror=intrinsics-std -Werror=line-truncation -Werror=tabs -Werror=target-lifetime -Werror=underflow -Werror=unused-but-set-variable -Werror=unused-variable -Werror=unused-dummy-argument -Werror=conversion -Werror=zerotrip -Werror=uninitialized -Wno-maybe-uninitialized -Wuse-without-only -D__LIBXSMM -D__FFTW3 -D__LIBINT -D__LIBINT_MAX_AM=6 -D__LIBDERIV_MAX_AM1=5 -D__LIBXC -D__HAS_smm_dnn -D__SPGLIB -D__JSON -D__SHORT_FILE__="\"dbcsr_machine.F\"" -I'/home/mozhdeh/cp2k/exts/dbcsr/src/base/' -I'/home/mozhdeh/cp2k/exts/dbcsr/src' dbcsr_machine.F90 /home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F:77:10: USE libxsmm, ONLY: libxsmm_timer_tick, libxsmm_timer_duration 1 Fatal Error: Cannot read module file ‘libxsmm.mod’ opened at (1), because it was created by a different version of GNU Fortran compilation terminated. /home/mozhdeh/cp2k/exts/dbcsr/Makefile:484: recipe for target 'dbcsr_machine.o' failed make[4]: *** [dbcsr_machine.o] Error 1 Makefile:135: recipe for target 'libdbcsr' failed make[3]: *** [libdbcsr] Error 2 /home/mozhdeh/cp2k/exts/Makefile.inc:16: recipe for target 'dbcsr' failed make[2]: *** [dbcsr] Error 2 make[2]: *** Waiting for unfinished jobs.... /home/mozhdeh/cp2k/Makefile:120: recipe for target 'ssmp' failed make[1]: *** [ssmp] Error 2 make[1]: *** Waiting for unfinished jobs.... /home/mozhdeh/cp2k/Makefile:120: recipe for target 'sopt' failed make[1]: *** [sopt] Error 2 /home/mozhdeh/cp2k/Makefile:120: recipe for target 'popt' failed make[1]: *** [popt] Error 2 /home/mozhdeh/cp2k/Makefile:120: recipe for target 'psmp' failed make[1]: *** [psmp] Error 2 /home/mozhdeh/cp2k/Makefile:120: recipe for target 'pdbg' failed make[1]: *** [pdbg] Error 2 /home/mozhdeh/cp2k/Makefile:120: recipe for target 'sdbg' failed make[1]: *** [sdbg] Error 2 Makefile:115: recipe for target 'all' failed make: *** [all] Error 2 </div></div></div> <div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Wed, Apr 17, 2019 at 4:21 PM Mozhdeh Mohammadpour <<a href="mailto:mozhdehmo...@gmail.com" target="_blank">mozhdehmo...@gmail.com</a>> wrote: </div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr"><div dir="ltr"><div class="gmail_default" style="font-family:georgia,serif;font-size:large">==================== Installing libvdwxc ==================== libvdwxc-master-429a80027a2ec2c97e2f6d9a3dc84843f2739865.tar.gz is found Installing from scratch into /home/mozhdeh/cp2k/tools/toolchain/install/libvdwxc-master-429a80027a2ec2c97e2f6d9a3dc84843f2739865 ERROR: (./scripts/install_libvdwxc.sh, line 65) Non-zero exit code detected. </div> -- <div dir="ltr"><div dir="ltr"><div><div dir="ltr">Mozhdeh Mohammapour<div>PhD, Physical Chemistry</div><div>Chemistry and chemical engineering research center of Iran</div></div></div></div></div></div></div> </blockquote></div> -- <div dir="ltr"><div dir="ltr"><div><div dir="ltr">Mozhdeh Mohammapour<div>PhD, Physical Chemistry</div><div>Chemistry and chemical engineering research center of Iran</div></div></div></div></div> </blockquote></div></div>