<div dir="ltr">Dear August,<div><br></div><div>  Adding to Flo's answer, did you realise that your cell is so small that the periodic replicas of the electron density might even overlap somewhat, not to mention a strong dipole-dipole interaction over the cells? (Also there is no need to use broadening/smearing and probably also not mixing; the cut-off energy of 300 Ry is a bit on the lower side, maybe still reasonable with PBE, with BLYP it would be low)</div>
<div><br></div><div>    Greetings from Sunny Zurich,</div><div><br></div><div>       apsi</div></div><div class="gmail_extra"><br><br><div class="gmail_quote">2014-03-08 1:37 GMT+01:00 August Melcher <span dir="ltr"><<a href="mailto:august...@gmail.com" target="_blank">august...@gmail.com</a>></span>:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Hello, I am trying to compute the energy of a single water molecule, but the I just keep getting a sum of isolated oxygen and two hydrogen atom energies.<div>
Here is my input:</div><div><div>&FORCE_EVAL</div><div><span style="white-space:pre-wrap">    </span> METHOD Quickstep</div><div> <span style="white-space:pre-wrap">       </span>&DFT</div><div> <span style="white-space:pre-wrap">                </span>UKS</div>
<div> <span style="white-space:pre-wrap">         </span>BASIS_SET_FILE_NAME /usr/common/usg/cp2k/2.1.534/tests/QS/GTH_BASIS_SETS</div><div>                POTENTIAL_FILE_NAME /usr/common/usg/cp2k/2.1.534/tests/QS/GTH_POTENTIALS</div>
<div> <span style="white-space:pre-wrap">         </span>&MGRID</div><div>                        NGRIDS 6</div><div> <span style="white-space:pre-wrap">                       </span>CUTOFF 300</div><div> <span style="white-space:pre-wrap">              </span>&END MGRID</div>
<div> <span style="white-space:pre-wrap">         </span>&QS</div><div> <span style="white-space:pre-wrap">                 </span>WF_INTERPOLATION ASPC</div><div> <span style="white-space:pre-wrap">                   </span>EXTRAPOLATION_ORDER 3</div><div>
 <span style="white-space:pre-wrap">            </span>&END QS</div><div> <span style="white-space:pre-wrap">             </span>&SCF</div><div> <span style="white-space:pre-wrap">                        </span>EPS_SCF 1.E-6</div><div> <span style="white-space:pre-wrap">                   </span>SCF_GUESS ATOMIC</div>
<div> <span style="white-space:pre-wrap">                 </span>MAX_SCF 400</div><div>                        &DIAGONALIZATION ON</div><div>                            ALGORITHM STANDARD</div><div>                        &END DIAGONALIZATION</div>
<div>                        &MIXING T</div><div>                            METHOD BROYDEN_MIXING</div><div>                            ALPHA 0.4</div><div>                            NBROYDEN 8</div><div>                        &END MIXING</div>
<div>                        &SMEAR ON</div><div>                            METHOD FERMI_DIRAC</div><div>                            ELECTRONIC_TEMPERATURE [K] 300</div><div>                        &END SMEAR</div>
<div>                        ADDED_MOS 10</div><div> <span style="white-space:pre-wrap">              </span>&END SCF</div><div> <span style="white-space:pre-wrap">            </span>&XC</div><div> <span style="white-space:pre-wrap">                 </span>&XC_FUNCTIONAL PBE</div>
<div> <span style="white-space:pre-wrap">                 </span>&END XC_FUNCTIONAL</div><div> <span style="white-space:pre-wrap">          </span>&END XC</div><div> <span style="white-space:pre-wrap">     </span>&PRINT</div><div> <span style="white-space:pre-wrap">      </span>&END PRINT</div>
<div> <span style="white-space:pre-wrap"> </span>&END DFT</div><div> <span style="white-space:pre-wrap">    </span>&SUBSYS</div><div> <span style="white-space:pre-wrap">             </span>&CELL</div><div> <span style="white-space:pre-wrap">                       </span>A   5.000000000 0.000000000 0.000000000</div>
<div>                        B  0.000000000 5.000000000 0.000000000</div><div>                        C  0.000000000 0.000000000 5.000000000</div><div> <span style="white-space:pre-wrap">               </span>&END CELL</div><div> <span style="white-space:pre-wrap">           </span>&COORD</div>
<div><br></div><div>                    O 2.790689766 2.0 2.0</div><div>                    H 2.0 2.0 2.612217330</div><div>                    H 3.581379532 2.0 2.612217330</div><div> <span style="white-space:pre-wrap">                </span>&END COORD</div>
<div><span style="white-space:pre-wrap">          </span>&KIND O</div><div> <span style="white-space:pre-wrap">                     </span>BASIS_SET DZVP-GTH</div><div> <span style="white-space:pre-wrap">                      </span>POTENTIAL GTH-PBE-q6</div><div>
 <span style="white-space:pre-wrap">            </span>&END KIND</div><div> <span style="white-space:pre-wrap">           </span>&KIND H</div><div> <span style="white-space:pre-wrap">                     </span>BASIS_SET DZVP-GTH</div><div> <span style="white-space:pre-wrap">                      </span>POTENTIAL GTH-PBE-q1</div>
<div> <span style="white-space:pre-wrap">         </span>&END KIND</div><div> <span style="white-space:pre-wrap">   </span>&END SUBSYS</div><div>&END FORCE_EVAL</div><div>&GLOBAL</div><div> <span style="white-space:pre-wrap">     </span>PROJECT water</div>
<div> <span style="white-space:pre-wrap"> </span>RUN_TYPE ENERGY</div><div> <span style="white-space:pre-wrap"> </span>PRINT_LEVEL LOW</div><div>&END GLOBAL</div><div><br></div></div><div>Both the box dimensions and coordinates are meant to be in angstroms. Any hints as to what I am doing wrong would be greatly appreciated.</div>
<div><br></div><div>Thanks,</div><div>August</div><span class="HOEnZb"><font color="#888888"><div><br></div></font></span></div><span class="HOEnZb"><font color="#888888">

<p></p>

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</font></span></blockquote></div><br><br clear="all"><div><br></div>-- <br><div dir="ltr">-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-<br>  Ari Paavo Seitsonen / <a href="mailto:Ari.P.S...@iki.fi" target="_blank">Ari.P.S...@iki.fi</a> / <a href="http://www.iki.fi/~apsi/" target="_blank">http://www.iki.fi/~apsi/</a><br>
  Institut für Chemie der Universität Zürich<br>  Tel: +41 44 63 55 44 97  /  Mobile: +41 79 71 90 935</div>
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