<div dir="ltr">Dear <span style="font-family:arial,sans-serif;font-size:13.513513565063477px">Cristiano,</span><div><span style="font-family:arial,sans-serif;font-size:13.513513565063477px"><br></span></div><div><span style="font-family:arial,sans-serif;font-size:13.513513565063477px"> This might not really help you, but I remember that on the "big" computer at our university OpenMPI 1.6.5 gave some error (I don't remember what the error was though), and thus I still use the version 1.4.5 when compiling. Did you try with for example version 1.7.2?</span></div>
<div><span style="font-family:arial,sans-serif;font-size:13.513513565063477px"><br></span></div><div><span style="font-family:arial,sans-serif;font-size:13.513513565063477px"> Greetings,</span></div><div><span style="font-family:arial,sans-serif;font-size:13.513513565063477px"><br>
</span></div><div><span style="font-family:arial,sans-serif;font-size:13.513513565063477px"> apsi</span></div></div><div class="gmail_extra"><br><br><div class="gmail_quote">2013/9/27 <span dir="ltr"><<a href="mailto:cristia...@gmail.com" target="_blank">cristia...@gmail.com</a>></span><br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Hi all,<br><br>I've succesfully compiled cp2k.popt with intel openmpi/1.6.5, mkl/11.0.1, libint/1.1.4 <br>
<br>my arch file (Linux-x86-64-intel.popt):<br><br><br>INTEL_LIB = $(INTEL_MKL)/lib/intel64<br>INTEL_INC = -I$(INTEL_MKL)/include -I$(INTEL_MKL)/include/fftw<br>INTEL_SCALAPACK = -L$(INTEL_LIB) -lmkl_scalapack_lp64 -lmkl_blacs_openmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core<br>
<br>LIBINT_PATH = <my_path to libint-1.1.4><br>LIBINT_LIB = <my_path to cp2k-2.4.0>/tools/hfx_tools/libint_tools/libint_cpp_wrapper.o $(LIBINT_PATH)/lib/libderiv.a $(LIBINT_PATH)/lib/libint.a -lstdc++<br><br>
<br>CC = icc<br>CPP =<br>FC = mpif90<br>LD = mpif90<br>AR = ar -r<br>DFLAGS = -D__HAS_NO_ISO_C_BINDING -D__INTEL -D__FFTSG -D__parallel -D__BLACS -D__SCALAPACK -D__FFTW3 -D__LIBINT -D__FFTMKL<br>
CPPFLAGS = -C -traditional $(DFLAGS) -I$(INTEL_INC)<br>FCFLAGS = $(DFLAGS) -I$(INTEL_INC) -O1 -heap-arrays 64 -fpp -free<br>FCFLAGS2 = $(DFLAGS) -I$(INTEL_INC) -O1 -heap-arrays 64 -fpp -free<br>LDFLAGS = $(FCFLAGS)<br>LIBS = -L$(INTEL_LIB) -mkl $(LIBINT_LIB) $(INTEL_SCALAPACK)<br>
<br>OBJECTS_ARCHITECTURE = machine_intel.o<br><br><br>graphcon.o: graphcon.F<br> $(FC) -c $(FCFLAGS2) $<<br><br>but when I run my test with input file<br><br>&GLOBAL<br> PROJECT test01<br> RUN_TYPE MD<br> PRINT_LEVEL LOW<br>
&END GLOBAL<br>&FORCE_EVAL<br> METHOD QS<br> &DFT<br> BASIS_SET_FILE_NAME ../../BASIS_MOLOPT<br> POTENTIAL_FILE_NAME ../../GTH_POTENTIALS<br> &MGRID<br> CUTOFF 400<br> NGRIDS 5<br> &END MGRID<br>
&QS<br> &END QS<br> &SCF<br> CHOLESKY OFF<br> MAX_SCF 40<br> SCF_GUESS ATOMIC<br> &OT<br> ENERGY_GAP 0.001<br> MINIMIZER CG<br> PRECONDITIONER FULL_ALL<br>
&END OT<br> &OUTER_SCF ON<br> EPS_SCF 1.0E-6<br> MAX_SCF 10<br> &END OUTER_SCF<br> &PRINT<br> &RESTART<br> &END<br> &RESTART_HISTORY<br> &END<br>
&END PRINT<br> &END SCF<br> &XC<br> &XC_FUNCTIONAL PBE<br> &END XC_FUNCTIONAL<br> &VDW_POTENTIAL<br> POTENTIAL_TYPE PAIR_POTENTIAL<br> &PAIR_POTENTIAL<br>
REFERENCE_FUNCTIONAL PBE<br> PARAMETER_FILE_NAME my_parameter.dat<br> TYPE DFTD3<br> R_CUTOFF [angstrom] 30<br> &END PAIR_POTENTIAL<br> &END VDW_POTENTIAL<br> &END XC<br>
&END DFT<br> &SUBSYS<br> &CELL<br> ABC 16.826 16.136 30.0<br> &END CELL<br> &TOPOLOGY<br> COORDINATE XYZ<br> COORD_FILE_NAME ./test01_ini.xyz<br> CONNECTIVITY OFF<br>
&END TOPOLOGY <br> ...<br> ...<br> ...<br> &END SUBSYS<br>&END FORCE_EVAL<br>&MOTION<br> &MD<br> ENSEMBLE NVE<br> STEPS 10000<br> TIMESTEP 0.5<br> TEMPERATURE 310.0<br>
TEMP_TOL 50.0<br> &END MD<br> &PRINT<br> &RESTART<br> &EACH<br> MD 1<br> &END<br> &END<br> &TRAJECTORY<br> &EACH<br> MD 1<br> &END EACH<br>
&END TRAJECTORY<br> &END PRINT<br>&END MOTION<br><br>cp2k.popt exit with:<br><br> *************************************************************************<br> *** 11:26:10 ERRORL2 in cp_dbcsr_cholesky:cp_dbcsr_cholesky_decompose ***<br>
*** processor 0 :: err=-300 condition FAILED at line 123 ***<br> *************************************************************************<br><br><br> ===== Routine Calling Stack =====<br><br> 11 cp_dbcsr_cholesky_decompose<br>
10 qs_ot_get_derivative<br> 9 ot_mini<br> 8 ot_scf_mini<br> 7 qs_scf_loop_do_ot<br> 6 scf_env_do_scf_inner_loop<br> 5 scf_env_do_scf<br> 4 qs_energies_scf<br>
3 qs_forces<br> 2 qs_mol_dyn_low<br> 1 CP2K<br><br>but the same run goes fine with a cp2k.popt compiled with intel openmpi/1.4.4, mkl/10.2.2, libint/1.1.4<br><br>does anyone know if cp2k/2.4 dosen't work fine with openmpi/1.6.5?<br>
any <span lang="en"><span>suggestions?<br><br>thanks for help!!!!<br><br>Cristiano<span class="HOEnZb"><font color="#888888"><br></font></span></span></span></div><span class="HOEnZb"><font color="#888888">
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</font></span></blockquote></div><br><br clear="all"><div><br></div>-- <br>-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-<br> Ari P Seitsonen / <a href="mailto:Ari.P.S...@iki.fi">Ari.P.S...@iki.fi</a> / <a href="http://www.iki.fi/~apsi/">http://www.iki.fi/~apsi/</a><br>
Physikalisch-Chemisches Institut der Universität Zürich<br> Tel: +41 44 63 55 44 97 / Mobile: +41 79 71 90 935
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