Hi Jörg,<br><br>libcblas.a is on the list, and I don't have .so version. What version of ATLAS are you using? I have 3.10.1 which was listed as the newest release.<br><br><br><br>On Monday, January 21, 2013 6:12:05 PM UTC+1, sassy wrote:<blockquote class="gmail_quote" style="margin: 0pt 0pt 0pt 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">Dear Jana,
<br>
<br>unless I am mistaken you forgot to link with the libcblas.a as well (or
<br>libcblas.so so you got it).
<br>With the more recent ATLAS installations, you can get one fat library which
<br>contains all you need: libsatlas.so
<br>I am using that way as it appears to be more forward.
<br>
<br>I hope that helps a bit.
<br>
<br>Regards
<br>
<br>Jörg
<br>
<br>On Monday 21 January 2013 16:06:48 Jana wrote:
<br>> Please, could you help me someone? I am still stuck with this last weeks
<br>> error, tho i tried to get different versions of libraries and mpi and all
<br>> links in ARCH seem to be fine, also no complaints in the output as far as I
<br>> could notice, except the one that executable wasnt created (so there must
<br>> be something wrong). The dflags and addresses i provided in arch should be
<br>> in the right order and correct, i used atlas instead of blas+lapack (I
<br>> listed all the libs in the lib directory)
<br>>
<br>> In order to determine what's wrong I tried to compile serial version only
<br>> with blas and lapack library but I got whole lot of stuff like that
<br>>
<br>> TL_lauumU.c:(.text+0x124): undefined reference to `cblas_ztrmm'
<br>> /home/mathausj/atl_jm/lib/<wbr>liblapack.a(ATL_clauumCL.o): In function
<br>> `ATL_clauumCL':
<br>> ATL_lauumL.c:(.text+0xe1): undefined reference to `cblas_cherk'
<br>> ATL_lauumL.c:(.text+0x123): undefined reference to `cblas_ctrmm'
<br>> /home/mathausj/atl_jm/lib/<wbr>liblapack.a(ATL_clauumCU.o): In function
<br>> `ATL_clauumCU':
<br>> ATL_lauumU.c:(.text+0xe1): undefined reference to `cblas_cherk'
<br>> ATL_lauumU.c:(.text+0x123): undefined reference to `cblas_ctrmm'
<br>> /home/mathausj/atl_jm/lib/<wbr>liblapack.a(ATL_clauumRL.o): In function
<br>> `ATL_clauumRL':
<br>> ATL_lauumL.c:(.text+0xe1): undefined reference to `cblas_cherk'
<br>> ATL_lauumL.c:(.text+0x123): undefined reference to `cblas_ctrmm'
<br>> /home/mathausj/atl_jm/lib/<wbr>liblapack.a(ATL_clauumRU.o): In function
<br>> `ATL_clauumRU':
<br>> ATL_lauumU.c:(.text+0xe1): undefined reference to `cblas_cherk'
<br>> ATL_lauumU.c:(.text+0x123): undefined reference to `cblas_ctrmm'
<br>> /home/mathausj/atl_jm/lib/<wbr>liblapack.a(dorm2l.o): In function `dorm2l_':
<br>> dorm2l.f:(.text+0x89): undefined reference to `lsame_'
<br>> dorm2l.f:(.text+0xab): undefined reference to `lsame_'
<br>> dorm2l.f:(.text+0xec): undefined reference to `lsame_'
<br>> dorm2l.f:(.text+0x124): undefined reference to `lsame_'
<br>> dorm2l.f:(.text+0x1e3): undefined reference to `xerbla_'
<br>>
<br>>
<br>>
<br>> Please, I will be really grateful for anything, because I really don't have
<br>> a clue what to do and it's been like that since last week. I am really
<br>> sorry to bother you but I have no experience with this sort of work and
<br>> neither does my superviser or anyone around at the department but i
<br>> desperatly need paralellized software because gaussian is not able to
<br>> perform the calculations i need for my thesis.
<br>>
<br>> On Thursday, January 17, 2013 4:00:02 PM UTC+1, Jana wrote:
<br>> > Hi,
<br>> >
<br>> > Ok, thanks. I have ended up eith an error again though
<br>> > ifort: error #10236: File not found:
<br>> > '/home/mathausj/cp2k-2.3/<wbr>makefiles/../exe/Linux-x86-64-<wbr>intel/cp2k.popt'
<br>> >
<br>> > On Thursday, January 17, 2013 3:42:50 PM UTC+1, Urban wrote:
<br>> >> Hi,
<br>> >>
<br>> >> You should edit your ARCH file to either explicitly include the paths to
<br>> >> these libraries (i.e., -l/path/to/lib/libatlas.a) or set the variable to
<br>> >> that path (whatever that variable is in the ARCH file you are using).
<br>> >>
<br>> >> Best regards,
<br>> >> Urban.
<br>> >>
<br>> >> On Thu, 2013-01-17 at 06:24 -0800, Jana wrote:
<br>> >> > Hi,
<br>> >> >
<br>> >> > I am trying to install parallel cp2k but I am having troubles with the
<br>> >> > libraries needed
<br>> >> >
<br>> >> > According to the install instructions getting atlas with lapack and
<br>> >> > scalapac should be enough to compile cp2k.
<br>> >> > So I have installed it but I got the atlas libraries
<br>> >> >
<br>> >> > libatlas.a
<br>> >> > libcblas.a
<br>> >> > libf77blas.a
<br>> >> > libf77refblas.a
<br>> >> > liblapack.a
<br>> >> > libptf77blas.a
<br>> >> > libptlapack.a
<br>> >> > libstalas.so
<br>> >> > libtatlas.so
<br>> >> > libstatlas.a
<br>> >> >
<br>> >> >
<br>> >> > but Linux-x86-64-intel.popt apparently requires another libs
<br>> >> >
<br>> >> > ifort: error #10236: File not found: '/libblacs_init.a'
<br>> >> > ifort: error #10236: File not found: '/libblacs.a'
<br>> >> > ifort: error #10236: File not found: '/libacml.a'
<br>> >> > ifort: error #10236: File not found: '/libacml_mv.a'
<br>> >> > ifort: error #10236: File not found: '/libfftw3.a'
<br>> >> >
<br>> >> > I am confused now,
<br>> >> > please could anybody help me?
<br>> >> >
<br>> >> > Sorry for a stupid question I have virtually no experience in this
<br>> >> > field...
<br>
<br>--
<br>******************************<wbr>******************************<wbr>*
<br>Jörg Saßmannshausen
<br>University College London
<br>Department of Chemistry
<br>Gordon Street
<br>London
<br>WC1H 0AJ
<br>
<br>email: <a href="javascript:" target="_blank" gdf-obfuscated-mailto="y1SbELdhaW0J">j.sas...@ucl.ac.uk</a>
<br>web: <a href="http://sassy.formativ.net" target="_blank">http://sassy.formativ.net</a>
<br>
<br>Please avoid sending me Word or PowerPoint attachments.
<br>See <a href="http://www.gnu.org/philosophy/no-word-attachments.html" target="_blank">http://www.gnu.org/philosophy/<wbr>no-word-attachments.html</a>
<br>
<br></blockquote>