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<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">OK Jana,</p>
<p style="-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; "> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">let us try with the parallel version... </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">you still did not answer me about the need for libint library? do you need that option in cp2k? what functional do you plan to use?</p>
<p style="-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; "> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">there is no need for 8) and depending on the configuration of the machine may be no need for 7 either.... </p>
<p style="-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; "> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">please let me know the output of the following commands...</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">mpif90 -show (execut this with both mpich2-intel loaded and unloaded)</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">icc</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">echo $MKLROOT</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">which ifort</p>
<p style="-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; "> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">regards,</p>
<p style="-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; "> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Alin</p>
<p style="-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; "> </p>
<p style="-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; "> </p>
<p style="-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; "> </p>
<p style="-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; "> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">On Tue 22 Jan 2013 11:23:40 you wrote:<br /></p>
<p style=" margin-top:12px; margin-bottom:12px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">I need the parallel version, I have only tried to do the serial because I thought I could gradually add the libs so I could determine what am I doing wrong, but it's not working anyway, so I am hopeless now.<br />It is a supercomputer...I wanted to use intel compiler, there's loads of modules available, I chose mpich2-intel. <br /><br />Currently Loaded Modulefiles:<br /> 1) modules 3) opensuse 5) metabase 7) mpich2-intel<br /> 2) <a href="http://ics.muni.cz"><span style=" text-decoration: underline; color:#006e28;">ics.muni.cz</span></a> 4) torque 6) intelcdk-12 8) gcc-4.5.2<br /><br />(6,7 and 8 are not there until I add them)<br /><br /><br /></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">On 21 January 2013 17:36, Alin M Elena <<a href="mailto:alinm...@gmail.com"><span style=" text-decoration: underline; color:#006e28;">alinm...@gmail.com</span></a>> wrote:<br /></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Ok... I see... </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">What are you trying to do? compile a parallel or serial version?</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">do you need the libint library?</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">what compilers are you trying to use?</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">is this on a supercomputer?</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">please do a module av</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">and a on fresh login</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">module list</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">regards,</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Alin</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">On Mon 21 Jan 2013 08:32:03 you wrote:<br /></p>
<p style=" margin-top:12px; margin-bottom:12px; margin-left:87px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Hi Alin,<br /><br />I've loaded modules gcc-4.5.2, mpich2-intel and intelcdk-12 (for ifort). <br />I used the arch file according to uname:<br />Linux 2.6.26-2-xen-amd64 #1 SMP Thu Apr 26 19:04:13 CEST 2012 x86_64 x86_64 x86_64 GNU/Linux<br /><br /><br />For the compilation from the makefiles directory I go just <br />$ make -j 20 ARCH=Linux-x86-64-intel VERSION=popt<br /><br />Here's the arch file<br /><br />CC = cc<br />CPP = <br />FC = ifort <br />LD = ifort<br />AR = ar -r<br />DFLAGS = -D__INTEL -D__FFTSG -D__parallel -D__SCALAPACK -D__BLACS -D__LAPACK -D__BLAS -D__FFTW3 -D__LIBINT<br />CPPFLAGS = <br />FCFLAGS = $(DFLAGS) -I$(INTEL_INC) -O3 -xW -heap-arrays 64 -funroll-loops -fpp -free<br /># FCFLAGS2 = $(DFLAGS) -I$(INTEL_INC) -O1 -xW -heap-arrays 64 -fpp -free<br />LDFLAGS = $(FCFLAGS) -I$(INTEL_INC)<br />LIBS = -l/home/mathausj/lib_sc/libscalapack.a \<br />-l/home/mathausj/BLACS/LIB/blacsF77init_MPI-LINUX-1.a \<br />-l/home/mathausj/BLACS/LIB/blacs_MPI-LINUX-1.a \<br />-l/home/mathausj/atl_jm/lib/liblapack.a \<br />-l/home/mathausj/atl_jm/lib/libptlapack.a \<br />-l/home/mathausj/atl_jm/lib/libatlas.a \<br />-l/home/mathausj/atl_jm/lib/libcblas.a \<br />-l/home/mathausj/atl_jm/lib/libf77blas.a \<br />-l/home/mathausj/atl_jm/lib/libf77refblas.a \<br />-l/home/mathausj/atl_jm/lib/libptf77blas.a \<br />-l/home/mathausj/atl_jm/lib/libsatlas.so \<br />-l/home/mathausj/atl_jm/lib/libtatlas.so \<br />-l/home/mathausj/atl_jm/lib/libtstatlas.a \<br />-l/home/mathausj/fftw/lib/libfftw3.a \<br />-l/home/mathausj/libint/adep/lib/libint2.a \<br /><br />OBJECTS_ARCHITECTURE = machine_intel.o<br /><br />graphcon.o: graphcon.F<br /> $(FC) -c $(FCFLAGS2) $<<br /><br /><br />On Monday, January 21, 2013 5:13:42 PM UTC+1, Alin Marin Elena wrote:</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:101px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Hi Jana,</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:101px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Can you please post the arch file you are using.. and the compiler versions... </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:101px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">also the commands you use are to generate the error.</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:101px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Alin</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:101px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"><br /><br /><br /></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">-- <br />You received this message because you are subscribed to the Google Groups "cp2k" group.<br />To view this discussion on the web visit <a href="https://groups.google.com/d/msg/cp2k/-/8hh2CrH5lDYJ"><span style=" text-decoration: underline; color:#006e28;">https://groups.google.com/d/msg/cp2k/-/8hh2CrH5lDYJ</span></a>.<br />To post to this group, send email to <span style=" text-decoration: underline; color:#006e28;">cp...@googlegroups.com</span>.<br />To unsubscribe from this group, send email to <span style=" text-decoration: underline; color:#006e28;">cp2k+...@googlegroups.com</span>.<br />For more options, visit this group at <a href="http://groups.google.com/group/cp2k?hl=en"><span style=" text-decoration: underline; color:#006e28;">http://groups.google.com/group/cp2k?hl=en</span></a>.<br /></p>
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<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Without Questions there are no Answers!</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">______________________________________________________________________</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Alin Marin ELENA</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Advanced Molecular Simulation Research Laboratory</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">School of Physics, University College Dublin</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">----</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Ardionsamblú Móilíneach Saotharlann Taighde</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Scoil na Fisice, An Coláiste Ollscoile, Baile Átha Cliath</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">-----------------------------------------------------------------------------------</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"><a href="http://alin.elenaworld.net"><span style=" text-decoration: underline; color:#006e28;">http://alin.elenaworld.net</span></a></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:94px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">______________________________________________________________________</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"><br /><br /></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">-- </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Without Questions there are no Answers!</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">______________________________________________________________________</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Alin Marin ELENA</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Advanced Molecular Simulation Research Laboratory</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">School of Physics, University College Dublin</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">----</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Ardionsamblú Móilíneach Saotharlann Taighde</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Scoil na Fisice, An Coláiste Ollscoile, Baile Átha Cliath</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
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<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"><a href="http://alin.elenaworld.net"><span style=" text-decoration: underline; color:#006e28;">http://alin.elenaworld.net</span></a></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:47px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">______________________________________________________________________</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"><br /><br /><br />-- <br /><br />---<br />S pozdravem<br />Jana Mathauserová<br /><br />+420 606 301 164<br />+44 079 79 217 846<br /></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"><br /><br /></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">-- </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Without Questions there are no Answers!</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">______________________________________________________________________</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Alin Marin ELENA</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Advanced Molecular Simulation Research Laboratory</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">School of Physics, University College Dublin</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">----</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Ardionsamblú Móilíneach Saotharlann Taighde</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Scoil na Fisice, An Coláiste Ollscoile, Baile Átha Cliath</p>
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<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">-----------------------------------------------------------------------------------</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">http://alin.elenaworld.net</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">______________________________________________________________________</p></body></html>