[CP2K-user] [CP2K:22426] Large time difference between NEB images
Sofia Scozziero
sofia.scozziero at gmail.com
Tue Sep 15 21:24:48 UTC 2026
Hi everyone,
I've recently started working with CP2K and I'm running into the following
issue. When doing NEB calculations some images take significantly more time
per OT step than others, I'm not talking about number of SCF steps to
converge but wall time per OT step, which is up to 15x slower for some of
the images (tipically I've found issues with maybe 2-3 images out of 12 per
run). Now a 2x-3x difference is manageable but when it gets past the 5x its
problematic. This has been happening running in a cluster on 3-4 nodes of
64 cpus each, and I'm running purely on MPI with this
mpirun -np $SLURM_NTASKS --bind-to core cp2k.psmp -i neb.inp -o neb.out
and open mp threads set explicitly to 1.
I've brought this up to my system admins and they haven't been able to
detect any issues like over subscription, load balancing or any of the
common culprits. I'm clueless on what could be happening. On the physics
side everything seems ok... I'm not getting any unreasonable energies or
gaps, the total charge and spin also seem ok.
I'm attaching my input (.inp file) and a shortened txt file with the lines
I'm more concerned about. I tested the convergence parameters vs a plane
wave calculation and with successive cp2k calculations so I believe they
should be Ok.
Extra note: I've tried on 1 and 2 nodes with a smaller system and this
problem didn't come up, granted being a different system it is not the same
problem.
Any help is welcome, and thanks in advance,
Sofía
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&MOTION
&BAND
NPROC_REP 16
BAND_TYPE CI-NEB
NUMBER_OF_REPLICA 10
K_SPRING 0.1 ! Ha/Bohr^2
ALIGN_FRAMES T
&OPTIMIZE_BAND
OPT_TYPE DIIS
OPTIMIZE_END_POINTS T
&DIIS
MAX_STEPS 500
&END DIIS
&END OPTIMIZE_BAND
&REPLICA
COORD_FILE_NAME start.xyz
&END REPLICA
&REPLICA
COORD_FILE_NAME end.xyz
&END REPLICA
&END BAND
&END MOTION
&FORCE_EVAL
METHOD QS
&DFT
BASIS_SET_FILE_NAME ../../../BASIS_MOLOPT
POTENTIAL_FILE_NAME ../../../GTH_POTENTIALS
#----------------
CHARGE -2
MULTIPLICITY 0
UKS
#----------------
&MGRID
REL_CUTOFF 80.0
NGRIDS 5
CUTOFF 800.0
&END MGRID
&QS
EPS_DEFAULT 1.0E-10
EPS_PGF_ORB 1.0E-6
&END QS
&SCF
SCF_GUESS ATOMIC
MAX_SCF 10
EPS_SCF 1.0E-5
&OUTER_SCF
EPS_SCF 1.0E-5
MAX_SCF 300
&END OUTER_SCF
&OT T
MINIMIZER DIIS
PRECONDITIONER FULL_SINGLE_INVERSE ! FULL_ALL
SAFE_DIIS T
ENERGY_GAP 0.05
STEPSIZE 0.2
ROTATION
&END OT
&END SCF
&XC
&XC_FUNCTIONAL
&MGGA_X_R2SCAN
&END MGGA_X_R2SCAN
&MGGA_C_R2SCAN
&END MGGA_C_R2SCAN
&END XC_FUNCTIONAL
&XC_GRID
XC_SMOOTH_RHO NN50
XC_DERIV NN50_SMOOTH
&END XC_GRID
&END XC
&END DFT
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