[CP2K-user] [CP2K:21591] Re: Runtypes ENERGY_FORCE and MD
Nauman Hafeez
hafeez.numan at gmail.com
Fri Jun 27 04:03:36 UTC 2025
Thanks so much, Marcella. You were right, the problem was not with the
convergence. It was my cluster settings - memory to be exact.
Best regards,
Nauman
On Thursday, 26 June 2025 at 03:02:25 UTC-4 Marcella Iannuzzi wrote:
> Hi Neuman,
>
> The SCF of the MD run did not even start, according to the output you
> posted. This is not a convergence problem.
> Most probably this is a memory issue, but it is hard to tell with these
> information.
> Regards
> Marcella
>
> On Wednesday, June 25, 2025 at 5:25:07 PM UTC+2 hafeez... at gmail.com wrote:
>
>> Dear CP2K developers and group,
>>
>> I have a system of two ions (Na+ and Cl-) in water, the total number of
>> atoms are ~2,500. I run this system using 48 cpu nodes and 256g of memory.
>> I've constructed the basis sets and pseudopotentials for the ions myself.
>> My goal is to run an MD simulation. When I run the system for energy and
>> forces the SCF converges very well simply using the OT setup with (mostly)
>> default setting. When I switch to MD, I get an segmentation fault error.
>>
>> The MD ENSEMBLE I use is NVT with TIMESTEP of 0.5 fs, and TEMPERATURE of
>> 300. I have tried changing the ENERGY_GAP to 0.1, choosing MINIMIZER as
>> CG and LINESEARCH as GOLD in OT settings, but system either doesn't
>> converge or I get the core dump error (Segmentation fault - invalid
>> memory reference).
>>
>> I was wondering how does the system converges with ENERGY_FORCE and not
>> with MD - is it that the system is not duly optimized? Or choice of my
>> basis set/pseudopotentials? I'm attaching the input script files for the MD
>> I tried and the output log.
>>
>> Any help or guidance will be much appreciated. Thank you in advance.
>>
>> Best,
>> Nauman
>>
>
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