[CP2K-user] [CP2K:21044] Re: CELL vs POISSON periodicities do not match. (I do not have an active POISSON section)
Michela Benazzi
bnzmichela at gmail.com
Wed Jan 15 15:58:40 UTC 2025
Hi Frederick, thank you for your response! However, I do not have an active
POISSON keyword/section. Are you saying that the POISSON solver is being
used anyways?
Michela
On Tuesday, January 14, 2025 at 9:30:52 AM UTC-5 Frederick Stein wrote:
> Dear Michela,
> By default, the Poisson solver assumes 3D-periodic systems (compare the
> manual
> https://manual.cp2k.org/trunk/CP2K_INPUT/FORCE_EVAL/DFT/POISSON.html).
> Best,
> Frederick
>
> Michela Benazzi schrieb am Dienstag, 14. Januar 2025 um 15:29:12 UTC+1:
>
>> Hello everyone,
>>
>> I am getting this error:
>> *** WARNING in pw_env_methods.F:742 :: The selected periodicities in the
>> *** *** sections &CELL and &POISSON do not match
>>
>> However, if you view my input file *below*, you will be able to see that
>> I do not have an active POISSON section. SCF steps are converging as normal
>> and my job is going through, so I am not quite sure if I should be worried
>> or disregard the error. I would appreciate any help with interpreting it!
>> Thank you kindly,
>>
>> Michela
>>
>> &GLOBAL
>> PROJECT_NAME 24h
>> RUN_TYPE MD
>> PRINT_LEVEL LOW
>> SAVE_MEM T
>> PREFERRED_DIAG_LIBRARY ScaLAPACK
>> &END GLOBAL
>>
>> &MOTION
>> &MD
>> ENSEMBLE NPT_I
>> STEPS 25000
>> TIMESTEP 0.5
>> TEMPERATURE 1.2+03
>> &BAROSTAT
>> PRESSURE 1.0100000000000000E+00
>> TIMECON 50
>> &THERMOSTAT
>> TYPE NOSE
>> &NOSE
>> TIMECON 50
>> &END NOSE
>> &END THERMOSTAT
>> &END BAROSTAT
>> &THERMOSTAT
>> TYPE NOSE
>> &NOSE
>> TIMECON 50
>> &END NOSE
>> REGION GLOBAL
>> &END THERMOSTAT
>> &END MD
>>
>> &PRINT
>> &TRAJECTORY SILENT
>> &EACH
>> MD 1
>> &END EACH
>> &END TRAJECTORY
>> &CELL SILENT
>> &EACH
>> MD 1
>> &END EACH
>> &END CELL
>> &VELOCITIES SILENT
>> &EACH
>> MD 1
>> &END EACH
>> &END VELOCITIES
>> &FORCES SILENT
>> &EACH
>> MD 1
>> &END EACH
>> &END FORCES
>> &RESTART SILENT
>> &EACH
>> MD 1
>> &END EACH
>> &END RESTART
>> &END PRINT
>> &END MOTION
>>
>>
>> &FORCE_EVAL
>> METHOD QS
>> STRESS_TENSOR ANALYTICAL
>> &DFT
>> BASIS_SET_FILE_NAME /opt/cp2k/data/BASIS_MOLOPT
>> POTENTIAL_FILE_NAME /opt/cp2k/data/POTENTIAL
>> &SCF
>> MAX_SCF 300
>> EPS_SCF 1.0000000000000002E-06
>> SCF_GUESS ATOMIC
>> ADDED_MOS 60
>> &DIAGONALIZATION T
>> ALGORITHM STANDARD
>> &END DIAGONALIZATION
>> &SMEAR T
>> METHOD FERMI_DIRAC
>> ELECTRONIC_TEMPERATURE 1.2000E+03
>> &END SMEAR
>> &MIXING T
>> METHOD BROYDEN_MIXING
>> ALPHA 5.0000000000000002E-02
>> &END MIXING
>> &PRINT
>> &RESTART OFF
>> &END RESTART
>> &END PRINT
>> &END SCF
>> &QS
>> EPS_DEFAULT 1.0000000000000000E-10
>> EXTRAPOLATION PS
>> METHOD GPW
>> &END QS
>> &MGRID
>> NGRIDS 5
>> CUTOFF 6.0000000000000000E+02
>> &END MGRID
>> &XC #should I add cutoffs?
>> &XC_FUNCTIONAL PBE
>> &END XC_FUNCTIONAL
>> &END XC
>> &END DFT
>> &SUBSYS
>> &CELL
>> A 11.452 0 0
>> B 0 11.452 0
>> C 0 0 34.356
>> PERIODIC XY
>> &END CELL
>> &KIND Al
>> BASIS_SET SZV-MOLOPT-SR-GTH
>> ELEMENT Al
>> POTENTIAL GTH-PBE-q3
>> &END KIND
>> &TOPOLOGY
>> COORD_FILE_NAME 64Al.xyz
>> COORD_FILE_FORMAT XYZ
>> NUMBER_OF_ATOMS 64
>> &END TOPOLOGY
>> &END SUBSYS
>> &END FORCE_EVAL
>>
>
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