[CP2K-user] [CP2K:21747] MD dftd4 in version 2025.1
Johann Pototschnig
pototschnig.johann at gmail.com
Thu Aug 14 13:37:20 UTC 2025
You could try switching off the reference code:
https://manual.cp2k.org/trunk/CP2K_INPUT/ATOM/METHOD/XC/VDW_POTENTIAL/PAIR_POTENTIAL.html#CP2K_INPUT.ATOM.METHOD.XC.VDW_POTENTIAL.PAIR_POTENTIAL.D4_REFERENCE_CODE
D4_REFERENCE_CODE .FALSE.
but I am not certain, if it will improve.
At the the end of the output there is timing information, e.g.:
-------------------------------------------------------------------------------
-
-
- T I M I N G
-
-
-
-------------------------------------------------------------------------------
SUBROUTINE CALLS ASD SELF TIME TOTAL
TIME
MAXIMUM AVERAGE MAXIMUM AVERAGE
MAXIMUM
CP2K 1 1.0 0.005 0.005 1.673
1.673
qs_energies 25 2.0 0.001 0.001 1.659
1.659
scf_env_do_scf 25 3.0 0.000 0.000 1.384
1.384
scf_env_do_scf_inner_loop 377 4.1 0.027 0.027 1.382
1.382
qs_scf_new_mos 377 5.1 0.003 0.003 1.266
1.266
...
Can you provide this.
It can be adjusted via:
&GLOBAL &TIMINGS THRESHOLD 0.1 &END TIMINGS &END GLOBAL
https://manual.cp2k.org/trunk/CP2K_INPUT/GLOBAL/TIMINGS.html
On Wednesday, August 13, 2025 at 9:44:39 AM UTC+2 Que Zhu wrote:
> CPK7 is so old.Why not try the latest version?
>
>
> Somayeh Ahmadkhani <so.ahm... at gmail.com> 于2025年8月12日周二 15:23写道:
>
>> Dear CP2K developers and users,
>>
>> I am running CP2K for a water system containing approximately 2,600
>> molecules.
>> With CP2K version 7, I was able to save around 50 steps in a 12-hour run.
>> However, after switching to a newer version, I now obtain data for only 2
>> steps in the same 12-hour period. Furthermore, when using the DFT-D4
>> correction, I can only obtain 1 step per 12 hours.
>>
>> Could you please help me understand and resolve this performance issue?
>> I have attached my SBATCH script and input file for more details, in case
>> they are useful.
>>
>> Thank you in advance for your support.
>>
>> Best regards,
>> my SBATCH script is as follows
>>
>> #!/bin/bash
>>
>> #SBATCH --job-name=cp2k
>>
>> #SBATCH --ntasks=64
>>
>> #SBATCH --mem=300G
>>
>> #SBATCH --nodes=4
>>
>> #SBATCH --time=12:00:00
>>
>> #SBATCH --error=cp2k_job.err
>>
>> module load intel/
>>
>> module load impi/2021.14
>>
>> module load cp2k/2025.1
>>
>> export *OMP_NUM_THREADS*=1
>>
>> ulimit -s unlimited
>>
>> mpirun cp2k.psmp -i PBE_water.inp -o out_put.out
>>
>> --
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>>
>
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