[CP2K-user] [CP2K:21731] *** WARNING in fm/cp_fm_elpa.F:522 :: Setting real_kernel for ELPA failed ***
jona...@hotmail.com
jonas.baa at hotmail.com
Sun Aug 10 09:35:24 UTC 2025
I have built Cp2k with the following toolchain command:"
./install_cp2k_toolchain.sh --install-all --with-tblite=no --with-ace=no
--with-gcc=system --math-mode=mkl --with-mkl=/opt/intel/oneapi/mkl/2025.2
--mpi-mode=openmpi --enable-cuda=yes --gpu-ver=A100 --target-cpu=znver2 -j
32 "
And built Gromacs with the following cmake command:"
cmake .. \
-DGMX_BUILD_OWN_FFTW=ON \
-DREGRESSIONTEST_DOWNLOAD=OFF \
-DCMAKE_INSTALL_PREFIX=~/gromacs \
-DBUILD_SHARED_LIBS=OFF \
-DGMX_PREFER_STATIC_LIBS=ON \
-DGMXAPI=OFF \
-DGMX_INSTALL_NBLIB_API=OFF \
-DGMX_DOUBLE=OFF \
-DGMX_SIMD=AVX2_256 \
-DGMX_MPI=ON \
-DGMX_GPU=CUDA \
-DGMX_CUDA_TARGET_SM="80" \
-DGMX_CP2K=ON \
-DCMAKE_CUDA_COMPILER=/usr/local/cuda-12.6//bin/nvcc \
-DCMAKE_C_COMPILER=/home/users/jonasbaa/WaterPhase/cp2k/tools/toolchain/install/openmpi-5.0.8/bin/mpicc
\
-DCMAKE_CXX_COMPILER=/home/users/jonasbaa/WaterPhase/cp2k/tools/toolchain/install/openmpi-5.0.8/bin/mpicxx
\
-DCMAKE_Fortran_COMPILER=/home/users/jonasbaa/WaterPhase/cp2k/tools/toolchain/install/openmpi-5.0.8/bin/mpifort
\
-DCP2K_DIR=/home/users/jonasbaa/WaterPhase/cp2k/lib/Linux-gnu-x86_64/psmp \
-DCP2K_LINKER_FLAGS=' To many flags to mention here '.
But when I run my energy minimization/simulation with the simple PBE
functional:"
; CP2K section
qmmm-cp2k-active = true ; Activate QMMM MdModule
qmmm-cp2k-qmgroup = QMatoms ; Index group of QM atoms
qmmm-cp2k-qmmethod = PBE ; Can be amended to INPUT and then use the
-qmi flag for a custom cp2k.inp file in the gmx_mpi_d grompp command.
qmmm-cp2k-qmcharge = 0 ; Charge of QM system
qmmm-cp2k-qmmultiplicity = 1 ; Multiplicity of QM system",
I get the following warning:" *** WARNING in fm/cp_fm_elpa.F:522 :: Setting
real_kernel for ELPA failed *** ", and as a result my GPU are not active
during the run. I would appreciate all help I can get on how to make sure
that the QM part of my QM/MM simulation can be done on the GPU. I assume it
can be done by solving this warning.
Best regards,
Jonas
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