[CP2K-user] [CP2K:20648] Re: Cp2k EMAX_SPLINE issue
Marcella Iannuzzi
marci.akira at gmail.com
Sun Sep 1 12:36:15 UTC 2024
Hello
The tilmestep of 5 fs is far too large to provide a reasonable integration
of the equations of motion. 0.5 fs is an appropriate value.
The SCF convergence tolerance (EPS_SCF) of 0.01 is not good enough, which
means that the forces are going to be very inaccurate. 1.E-6 is a commonly
used value.
Regards
Marcella
On Saturday, August 31, 2024 at 9:57:26 PM UTC+2 atomic... at gmail.com wrote:
> Dear cp2k users,
>
> I am a very new user of cp2k and am trying to run a QM/MM calc of a
> molecule (QM part) containing 90 C atoms and 48 H atoms placed on a
> 3-layered Au (contains 614 Au atoms) surface (MM part). After each time
> after the 3rd step, the system does not converge and shows an inner SCF
> loop. With that it shows, " *GEOMETRY wrong or EMAX_SPLINE too small! *"
> Please, help assist me in solving the error.
> I am attaching input in text format as well as in file format.
>
> &GLOBAL
> PROJECT Au-sf-s-grap-6-h-2
> RUN_TYPE md
> &END GLOBAL
>
> &MOTION
> &MD
> ENSEMBLE NVE
> STEPS 1000
> TEMPERATURE 300.0
> TIMESTEP 5.0
> &END MD
> &CONSTRAINT
> &FIXED_ATOMS
> COMPONENTS_TO_FIX XYZ ! Fix all components (X, Y, Z) of the
> selected atoms
> LIST 1..614
> &END FIXED_ATOMS
> &END CONSTRAINT
> &END MOTION
>
> &FORCE_EVAL
> METHOD QMMM
> &DFT
> BASIS_SET_FILE_NAME
> /home/administrator/software/cp2k-2024.1/data/BASIS_MOLOPT
> POTENTIAL_FILE_NAME
> /home/administrator/software/cp2k-2024.1/data/GTH_POTENTIALS
> &MGRID
> COMMENSURATE
> CUTOFF 300
> &END MGRID
> &QS
> &END QS
> &SCF
> SCF_GUESS ATOMIC
> EPS_SCF 1.0E-2
> MAX_SCF 50
>
> &END SCF
> &XC
> &XC_FUNCTIONAL PBE
> &END XC_FUNCTIONAL
> &END XC
> &END DFT
> &MM
> &FORCEFIELD ! Set up a force_field for the classical
> calculations
> &SPLINE
> EPS_SPLINE 1.E-2 ! Parameters to set up the
> splines used in the nonboned interactions
> EMAX_SPLINE 10 ! Maximum value of the potential up to
> which splines will be constructed
> RCUT_NB [angstrom] 10 ! Cutoff radius for nonbonded interactions
> &END SPLINE
> &BOND
> ATOMS C C
> K 0.
> R0 1.54
> &END BOND
> &BOND
> ATOMS C C
> K 0.
> R0 1.33
> &END BOND
> &BOND
> ATOMS C H
> K 0.
> R0 1.07
> &END BOND
> &CHARGE
> ATOM Au
> CHARGE 0.0
> &END CHARGE
> &CHARGE
> ATOM C
> CHARGE 0.0
> &END CHARGE
> &CHARGE
> ATOM H
> CHARGE 0.0
> &END CHARGE
> &NONBONDED
> &LENNARD-JONES
> ATOMS C C
> EPSILON 33.0
> RCUT 10.0
> SIGMA 3.4
> &END LENNARD-JONES
> &LENNARD-JONES
> ATOMS C H
> EPSILON 24.0
> RCUT 10.0
> SIGMA 3.02
> &END LENNARD-JONES
> &LENNARD-JONES
> ATOMS H H
> EPSILON 17.0
> RCUT 10.0
> SIGMA 2.6
> &END LENNARD-JONES
> &LENNARD-JONES
> ATOMS Au C
> EPSILON 147.0
> RCUT 10.0
> SIGMA 2.9
> &END LENNARD-JONES
> &LENNARD-JONES
> ATOMS Au H
> EPSILON 6.0
> RCUT 10.0
> SIGMA 3.7
> &END LENNARD-JONES ! This section specifies the input parameters
> for NON-BONDED interactions
> &EAM ! This section specifies the input parameters for EAM
> potential type
> atoms Au Au
> PARM_FILE_NAME
> /home/administrator/software/cp2k-2024.1/tests/Fist/EAM_LIB/Au.pot
> &END EAM
> &END NONBONDED
> &END FORCEFIELD
> &POISSON
> PERIODIC XYZ # Periodic boundary conditions in all
> directions
> POISSON_SOLVER PERIODIC
> &EWALD
> GMAX 25 25 25
> &END EWALD
> &END POISSON
>
> &END MM
> &QMMM
> NOCOMPATIBILITY
> &CELL
> ABC 48.81966 38.34409 50.0000
> ALPHA_BETA_GAMMA 90 90 90
> PERIODIC XYZ
> &END CELL
> &IMAGE_CHARGE
> DETERM_COEFF ITERATIVE
> MM_ATOM_LIST 1..614
> &END IMAGE_CHARGE
> &PRINT
> &IMAGE_CHARGE_INFO
> &END IMAGE_CHARGE_INFO
> &END PRINT
> &QM_KIND C
> MM_INDEX 615..704
> &END QM_KIND
> &QM_KIND H
> MM_INDEX 705..752
> &END QM_KIND
> &END QMMM
> &SUBSYS
> &CELL
> ABC 48.81966 38.34409 50.0000
> ALPHA_BETA_GAMMA 90 90 90
> PERIODIC XYZ
> &END CELL
> &KIND C
> BASIS_SET DZVP-MOLOPT-GTH
> POTENTIAL GTH-PBE-q4
> &END KIND
> &KIND H
> BASIS_SET DZVP-MOLOPT-GTH
> POTENTIAL GTH-PBE-q1
> &END KIND
> &TOPOLOGY
> COORDINATE XYZ
> COORD_FILE_NAME ./Au-sf-s-Au-apex-grap-6-h-2-cp2k-new.xyz
> &END TOPOLOGY
> &END SUBSYS
> &END FORCE_EVAL
>
>
> —
> Aditya Barman
> Research Scholar,
> Department of Chemistry,
> Manipal University Jaipur
>
>
>
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