[CP2K-user] [CP2K:20925] Re: Slow AIMD Calculations and Memory Issues
Jawad Elhamdaoui
jawadelhamdaoui11 at gmail.com
Wed Nov 27 14:13:05 UTC 2024
Dear Frederick,
Thank you for your prompt response.
Please find attached the output file. Regarding the input, I used the same
file I uploaded earlier, but I commented out the cell part to restart the
calculationa and add the restart part.
Please let me know if you need any further details.
Best regards
Jawad
On Wed, Nov 27, 2024 at 2:52 PM Frederick Stein <f.stein at hzdr.de> wrote:
> Dear Jawad,
> Without any output file, it is hard to guess what the issue is. Could you
> maybe run a short MD (a few frames) and provide the output file? I am
> especially interested in the statistics part at the end of the output file
> (Timing report, "MEMORY| Estimated peak process memory [MiB]"). Please
> provide the full input file you used (not necessarily the geometry files)
> because you commented out the cell definition in your input file.
> Best,
> Frederick
>
> Jawad Elhamdaoui schrieb am Mittwoch, 27. November 2024 um 14:26:48 UTC+1:
>
>> Dear CP2K Community,
>>
>> I am facing issues with my AIMD calculations. My *system size is *162
>> atoms, and I run on an *HPC setup of* 500 CPUs. Each step takes ~15
>> minutes, and I also encounter out-of-memory errors.
>>
>> I suspect the issues might be due to input settings or parallelization
>> inefficiencies. Could you please advise how to optimize performance and
>> memory usage for a system of this size?
>>
>> I appreciate your help!
>>
>> Best regards,
>>
>> Jawad
>>
> --
> You received this message because you are subscribed to the Google Groups
> "cp2k" group.
> To unsubscribe from this group and stop receiving emails from it, send an
> email to cp2k+unsubscribe at googlegroups.com.
> To view this discussion visit
> https://groups.google.com/d/msgid/cp2k/463afbde-75aa-4338-9eeb-3f4d64cd4227n%40googlegroups.com
> <https://groups.google.com/d/msgid/cp2k/463afbde-75aa-4338-9eeb-3f4d64cd4227n%40googlegroups.com?utm_medium=email&utm_source=footer>
> .
>
--
You received this message because you are subscribed to the Google Groups "cp2k" group.
To unsubscribe from this group and stop receiving emails from it, send an email to cp2k+unsubscribe at googlegroups.com.
To view this discussion visit https://groups.google.com/d/msgid/cp2k/CAN8qg5zB8pc1FLuxVtaHrXaDOmuWLocrkxvom6vnTo0HPMPU-g%40mail.gmail.com.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20241127/af0dd88c/attachment-0001.htm>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: FAP_AIMD_500bar_1300K.out
Type: application/octet-stream
Size: 7157089 bytes
Desc: not available
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20241127/af0dd88c/attachment-0001.obj>
More information about the CP2K-user
mailing list