[CP2K-user] [CP2K:20624] Barostat/Thermostat mass units?
Michela Benazzi
bnzmichela at gmail.com
Tue Aug 27 13:06:47 UTC 2024
Hello CP2K users,
I have previously asked a question about what kind of barostat CP2K uses,
and Thomas Kuhne linked a paper on MTTK barostat which was very helpful
(https://aiichironakano.github.io/phys516/Martyna-Integrator-MolPhys96.pdf).
However, I tried to calculate my barostat mass to understand the units and
I am still at a loss - currently, my restart BAROSTAT MASS is
3.1175614526535734E+006. According to the CP2K manual, the units could be
kg, m_e or amu. I tried to calculate it myself following the MTTK formula
and there is no match:
W = (N_f + 9)* (k_b*T)/2 * (t_p/2pi)^2
where t_p is the time constant (50 fs), T = 1200 K and N_f is degrees of
freedom (aka number of atoms? 64 in my system).
My result is 6.0124759e-47 J (kg*m2), which is in units of moment of
inertia. Even if I convert it to m_e or amu it does not match:
6.0124759e-47 J (kg*m2)
(or 3.61328477e+27 amu*m2)
(or 6.60031109024e-17 m_e*m2)
I was wondering if:
1) there are other units I have not considered in CP2K, or if CP2K
internally converts to something else.
2) Degrees of freedom =/= number of atoms?
3) I am supposed to get rid of the m2 term by dividing by area in some way,
although I am not sure how scientifically sound it would be, since we have
a 3D unit cell.
Thank you very much!
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