[CP2K-user] [CP2K:20606] Re: CP2k Installation Error
bharat poudel
bharatpoudel3 at gmail.com
Thu Aug 22 19:53:26 UTC 2024
Here is more info:
/usr/bin/env python3
/qscratch/bpoudel/apps/cp2k/exts/dbcsr/tools/build_utils/fypp/bin/fypp -n
--line-marker-format=gfortran5
/qscratch/bpoudel/apps/cp2k/exts/dbcsr/src/base/dbcsr_machine.F
dbcsr_machine.F90
/usr/bin/env python3
/qscratch/bpoudel/apps/cp2k/exts/dbcsr/tools/build_utils/fypp/bin/fypp -n
--line-marker-format=gfortran5
/qscratch/bpoudel/apps/cp2k/exts/dbcsr/src/base/dbcsr_machine.F
dbcsr_machine.F90
/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/openmpi-5.0.5/bin/mpifort
-c -fno-omit-frame-pointer -fopenmp -g -march=native -mtune=native -O1
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/openmpi-5.0.5/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/openblas-0.3.28/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/fftw-3.3.10/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/libint-v2.6.0-cp2k-lmax-5/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/libxc-6.2.2/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/libgrpp-main-20231225/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/libxsmm-1.17/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/COSMA-2.6.6/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/scotch-6.0.0/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/superlu_dist-6.1.0/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/pexsi-1.2.0/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/gsl-2.7/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/libdeepmd_c-2.2.7/include'
-I/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/hdf5-1.14.2/include
-I/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/libvdwxc-0.4.0/include
-I/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/spglib-2.3.1/include
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/SpFFT-1.1.0/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/SpLA-1.6.1/include/spla'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/dftd4-3.6.0/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/dftd4-3.6.0/include/dftd4/GNU-14.1.0'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/dftd4-3.6.0/include/mctc-lib/GNU-14.1.0'
-fbacktrace -ffree-form -fimplicit-none -std=f2008 -fsanitize=leak
-fcheck=all,no-array-temps -ffpe-trap=invalid,zero,overflow -finit-derived
-finit-real=snan -finit-integer=-42 -Werror=realloc-lhs
-finline-matmul-limit=0 -Werror=aliasing -Werror=ampersand
-Werror=c-binding-type -Werror=intrinsic-shadow -Werror=intrinsics-std
-Werror=line-truncation -Werror=tabs -Werror=target-lifetime
-Werror=underflow -Werror=unused-but-set-variable -Werror=unused-variable
-Werror=unused-dummy-argument -Werror=unused-parameter -Werror=unused-label
-Werror=conversion -Werror=zerotrip -Wno-maybe-uninitialized
-Wuninitialized -Wuse-without-only -D__LIBXSMM -D__parallel -D__MPI_F08
-D__FFTW3 -D__LIBINT -D__LIBXC -D__LIBGRPP -D__parallel -D__COSMA
-D__LIBPEXSI -D__GSL -D__PLUMED2 -D__DEEPMD -D__HDF5 -D__LIBVDWXC
-D__SPGLIB -D__LIBVORI -D__LIBTORCH -D__SPFFT -D__SPLA -D__DFTD4
-D__HAS_IEEE_EXCEPTIONS -D__CHECK_DIAG -fallow-argument-mismatch
-D__SHORT_FILE__="\"dbcsr_machine.F\""
-I'/qscratch/bpoudel/apps/cp2k/exts/dbcsr/src/base/'
-I'/qscratch/bpoudel/apps/cp2k/exts/dbcsr/src' dbcsr_machine.F90
/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/openmpi-5.0.5/bin/mpifort
-c -fno-omit-frame-pointer -fopenmp -g -march=native -mtune=native -O3
-funroll-loops
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/openmpi-5.0.5/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/openblas-0.3.28/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/fftw-3.3.10/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/libint-v2.6.0-cp2k-lmax-5/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/libxc-6.2.2/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/libgrpp-main-20231225/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/libxsmm-1.17/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/COSMA-2.6.6/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/scotch-6.0.0/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/superlu_dist-6.1.0/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/pexsi-1.2.0/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/gsl-2.7/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/libdeepmd_c-2.2.7/include'
-I/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/hdf5-1.14.2/include
-I/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/libvdwxc-0.4.0/include
-I/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/spglib-2.3.1/include
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/SpFFT-1.1.0/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/SpLA-1.6.1/include/spla'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/dftd4-3.6.0/include'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/dftd4-3.6.0/include/dftd4/GNU-14.1.0'
-I'/qscratch/bpoudel/apps/cp2k/tools/toolchain/install/dftd4-3.6.0/include/mctc-lib/GNU-14.1.0'
-fbacktrace -ffree-form -fimplicit-none -std=f2008 -Werror=aliasing
-Werror=ampersand -Werror=c-binding-type -Werror=intrinsic-shadow
-Werror=intrinsics-std -Werror=line-truncation -Werror=tabs
-Werror=target-lifetime -Werror=underflow -Werror=unused-but-set-variable
-Werror=unused-variable -Werror=unused-dummy-argument
-Werror=unused-parameter -Werror=unused-label -Werror=conversion
-Werror=zerotrip -Wno-maybe-uninitialized -Wuninitialized
-Wuse-without-only -D__LIBXSMM -D__parallel -D__MPI_F08 -D__FFTW3
-D__LIBINT -D__LIBXC -D__LIBGRPP -D__parallel -D__COSMA -D__LIBPEXSI
-D__GSL -D__PLUMED2 -D__DEEPMD -D__HDF5 -D__LIBVDWXC -D__SPGLIB -D__LIBVORI
-D__LIBTORCH -D__SPFFT -D__SPLA -D__DFTD4 -fallow-argument-mismatch
-D__SHORT_FILE__="\"dbcsr_machine.F\""
-I'/qscratch/bpoudel/apps/cp2k/exts/dbcsr/src/base/'
-I'/qscratch/bpoudel/apps/cp2k/exts/dbcsr/src' dbcsr_machine.F90
my gcc version is 14.1.0
On Thursday, August 22, 2024 at 1:44:42 PM UTC-6 bharat poudel wrote:
> Hi There
>
> I encountered this error while installing CP2K.
>
> *f951:* *Fatal Error:* Reading module ‘*dbcsr_kinds.mod*’ at line 1
> column 2: Unexpected EOF
>
> compilation terminated.
>
> make[4]: *** [/qscratch/bpoudel/apps/cp2k/exts/build_dbcsr//Makefile:266:
> dbcsr_machine.o] Error 1
>
> make[3]: *** [/qscratch/bpoudel/apps/cp2k/exts/build_dbcsr/Makefile:187:
> libdbcsr] Error 2
>
> make[2]: *** [/qscratch/bpoudel/apps/cp2k/exts/Makefile.inc:38: dbcsr]
> Error 2
>
> make[2]: *** Waiting for unfinished jobs....
>
> *f951:* *Fatal Error:* Reading module ‘*dbcsr_kinds.mod*’ at line 1
> column 2: Unexpected EOF
>
> compilation terminated.
>
>
> It looks like this one is related to fortran. I am installing it on the
> cluster with openmpi and plumed.
>
>
> Really looking forward for the help.
>
>
> Bharat
>
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